Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 302 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  206 bits (523), Expect = 7e-58
 Identities = 108/290 (37%), Positives = 166/290 (57%), Gaps = 3/290 (1%)

Query: 1   MEHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTD 60
           M+ ++ L  FV V +CGSF+ A  K  ++   + +R+  LE+HLG++L+ R+TR LSLTD
Sbjct: 1   MDRYTTLRSFVLVADCGSFAAAAHKENVTPVVMGRRLDALERHLGVKLMHRSTRGLSLTD 60

Query: 61  AGARYFEYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPD 120
            G +Y E  R  ++   E   +IS  + + RG+L +S P  FGR +I P    F  RYPD
Sbjct: 61  LGEQYLERARGLLKDFDEVDASISHDRTSVRGHLVVSAPAAFGRRHIGPHAPAFQARYPD 120

Query: 121 IQLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMT 180
           +QL     D + DL+  G+D+ IRIGE+ D + +A ++ P   V+C SP Y  +HG P  
Sbjct: 121 LQLSFNFTDSVVDLVRHGYDMGIRIGEVTDPNYVAVRLFPNRRVVCGSPEYFARHGTPTA 180

Query: 181 PCELTQHNCLFYSYFQDGVE--WSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIAN 238
             ELT+HNCL ++  Q G +  W+F        ++  GN   N+ + +      GLGI  
Sbjct: 181 LEELTEHNCLAFN-LQGGQQRGWTFLRDGRQVAIRVAGNLDCNDGELLFDWVKQGLGIGW 239

Query: 239 LPRFIVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFL 288
              + ++ +L+ G L  +L +Y LP + I AVYPQ++Y P KV   I++L
Sbjct: 240 RSTWEIQAELKRGELVTVLDEYALPAYDIQAVYPQQRYLPAKVRFFIDYL 289