Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 304 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  207 bits (528), Expect = 2e-58
 Identities = 111/298 (37%), Positives = 173/298 (58%), Gaps = 4/298 (1%)

Query: 1   MEHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTD 60
           M+  S + +   VVE GSFS AG+ LG++ S++S+++S LE  LG QLL RTTR LSLT+
Sbjct: 1   MDILSGMRLLSRVVEAGSFSEAGRLLGMAPSSVSRQVSALEDTLGTQLLNRTTRRLSLTE 60

Query: 61  AGARYFEYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPD 120
           AG  + +     +   ++    +S L+  PRG L+++VP+ FG  ++AP +  FL RYPD
Sbjct: 61  AGGLFHDRALRILADVEDATRVVSSLESAPRGTLKLNVPVGFGNYHVAPALPLFLARYPD 120

Query: 121 IQLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMT 180
           + + + + D   DLI  G D+A+RIG L DSSL+AR++A    ++  SP YL + G P T
Sbjct: 121 LTVDLTLSDHFIDLIEEGVDVAVRIGALRDSSLVARRLADNRRMVYGSPDYLRRMGTPET 180

Query: 181 PCELTQHNCLFYSYFQDGVEWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIANLP 240
           P +LT H C+ Y Y      W F        +   G    NNS+++++  L G G+A LP
Sbjct: 181 PHDLTAHRCIAYRYRPGPQGWLFERDGIRLDITVTGPLTANNSESLHKMILGGSGLAMLP 240

Query: 241 RFIVEPDLQTGHLQALLTDYPLP----EHGIYAVYPQRKYQPTKVTVLIEFLMAKLGQ 294
            ++   D+++G L  LL D+ +     E  I+ VYP+ ++   KV   I+F+   +G+
Sbjct: 241 TWMAYSDVKSGLLVPLLGDWTMSPTSLESAIHVVYPESRHLSAKVRAFIDFMADHIGK 298