Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  216 bits (551), Expect = 4e-61
 Identities = 121/296 (40%), Positives = 168/296 (56%), Gaps = 2/296 (0%)

Query: 1   MEHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTD 60
           M+  + +  F  V E GSFS A ++LGLS+S +SK +S LE  LG +L+ RTTR LSLT+
Sbjct: 1   MDRLTLMETFTKVAELGSFSRAAERLGLSRSVVSKYVSALEDRLGARLVNRTTRRLSLTE 60

Query: 61  AGARYFEYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPD 120
            G  Y    +  +   +E   A   L    RG LRI+ PM FG  ++A  I  FL  +P 
Sbjct: 61  VGEVYLLRCQAILADLEEAEQAAGALHGAARGTLRINAPMSFGFRHLAAAIPPFLAHHPG 120

Query: 121 IQLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMT 180
           + + M +DD+  DL+  GFD+A+RIG LPDSSLIA ++AP   V+CASP Y+   G P  
Sbjct: 121 LGVDMTLDDRFVDLLDAGFDVAVRIGSLPDSSLIAVRLAPLHIVVCASPEYIKAQGAPER 180

Query: 181 PCELTQHNCLFYSYFQDGVEWSF-HSPDGMQ-RVQPKGNYQVNNSDAINQACLDGLGIAN 238
           P +LT HNCL YS  + G  +   H+  G Q  V   G ++ NN DA+  A + G G+  
Sbjct: 181 PEDLTGHNCLIYSLQRFGDLYPLVHAGGGEQVSVPVHGRFRANNGDALRAAAVAGGGVMI 240

Query: 239 LPRFIVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLMAKLGQ 294
            P F+   DL+ G L  LL ++  PE GI AVYP  ++   KV   ++ L    G+
Sbjct: 241 SPTFLCGDDLRAGRLVRLLPEWTGPEQGINAVYPHNRHVSAKVRAFVDHLKGWCGK 296