Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 307 a.a., LysR family transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score =  212 bits (539), Expect = 1e-59
 Identities = 121/295 (41%), Positives = 168/295 (56%), Gaps = 7/295 (2%)

Query: 4   FSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDAGA 63
           F AL IF  VVE  SF+    + GLSK+ +SK +++LE  LG +L  RT+R L+LTDAG 
Sbjct: 7   FEALAIFAKVVELRSFAAVAAEFGLSKATVSKAVTRLETRLGARLFNRTSRRLALTDAGH 66

Query: 64  RYFEYIRPAVQLTQEGLDAISEL---QQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPD 120
           R  E    A QL  +G  A +E       PRG +R++VPM FG   IAPL+ EF   YPD
Sbjct: 67  RLAER---AAQLLADGEAAEAEALAQSAAPRGLVRLAVPMTFGVKVIAPLLPEFFAAYPD 123

Query: 121 IQLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMT 180
           + + + + D + DLI  GFD  +RI  LPDSSL+AR++        AS  YL  +G P  
Sbjct: 124 VSIDLHLSDAMVDLIGDGFDAGVRIATLPDSSLVARRLCAMPRYTVASKTYLEAYGRPTH 183

Query: 181 PCELTQHNCLFYSYFQDGVEWSFHSPDGMQ-RVQPKGNYQVNNSDAINQACLDGLGIANL 239
           P  L QH CL Y+Y      W + +  G Q  V+P G  +VNN +A+  + + GLGIA+L
Sbjct: 184 PMHLAQHRCLGYAYLSTPNTWHYSNDAGDQVAVRPGGPLRVNNGEALLPSVIAGLGIADL 243

Query: 240 PRFIVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLMAKLGQ 294
           P FIV   +  G ++ +L  +   E  ++ V P    +P +V VL EFL  +LG+
Sbjct: 244 PEFIVGDAIAAGEVEVILDGWHQREGAVHLVTPPGGPRPARVEVLSEFLADRLGR 298