Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 302 a.a., LysR family transcriptional regulator from Pantoea sp. MT58

 Score =  215 bits (548), Expect = 9e-61
 Identities = 111/298 (37%), Positives = 171/298 (57%), Gaps = 4/298 (1%)

Query: 1   MEHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTD 60
           M+  +++ +FVTV E GSF+ A  KL +S   ++K I+ LE+HLG  LL RTTR  SLTD
Sbjct: 1   MDRLTSMNVFVTVAESGSFAAAAGKLLISPQMVAKHIATLEKHLGTLLLHRTTRRQSLTD 60

Query: 61  AGARYFEYIRPAVQLTQEGLDAIS-ELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYP 119
            G  Y+E  +  +   QE  DAI+ ++QQ P G L++S P+ FG   +AP +  +L R+P
Sbjct: 61  VGRNYYERCKIVLAEVQEA-DAIALDMQQRPSGTLKVSAPVTFGSFSLAPFVTRYLDRFP 119

Query: 120 DIQLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPM 179
           D Q+ +++ D++ D    G+++ IRIG LPDSS+IA  + P   + CASPAYL +HG P 
Sbjct: 120 DTQVDLELSDRLVDPFEEGYEVVIRIGALPDSSIIAHPLKPYELIACASPAYLARHGFPA 179

Query: 180 TPCELTQHNCLFYSYFQDG--VEWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIA 237
           TP +L  H CL Y  +       W F     ++ V P+G  + N+  A+  A L+G GI 
Sbjct: 180 TPADLENHACLVYGIWSPSKPCRWVFTQAGKVEEVHPQGRMRSNDWKALLHAALEGYGIT 239

Query: 238 NLPRFIVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLMAKLGQY 295
             P  I+  +++ G L  +L DY  P   ++ + P  + Q  K+   ++ ++   G Y
Sbjct: 240 LGPASILSEEIRQGRLVQVLPDYAGPARPMHVLIPAGRRQTVKIRSFVKAIITGFGLY 297