Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., LysR family transcriptional regulator from Pantoea sp. MT58

 Score =  222 bits (565), Expect = 9e-63
 Identities = 124/293 (42%), Positives = 175/293 (59%), Gaps = 5/293 (1%)

Query: 1   MEHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTD 60
           M+      +FVTV+E GSFS A  +LG S S  SK +S+LEQ LG+QLL+R+TR+LS TD
Sbjct: 1   MDRLDCDRMFVTVLETGSFSAAALRLGTSSSQASKLVSKLEQQLGVQLLKRSTRALSPTD 60

Query: 61  AGARYFEYIRPAVQLTQEGLDA-ISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYP 119
            G  Y+E ++  +    E LDA + E   TP G L+IS P  FG   ++ ++  F +RYP
Sbjct: 61  VGRSYYERVKNLLDAF-EALDASVRESATTPTGRLKISAPGSFGTAVLSQVLVAFARRYP 119

Query: 120 DIQLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPM 179
            I+L +   D+  +++  GFD+AIRIG L DSSL+ARK++     I ASP YL Q G P 
Sbjct: 120 LIELDVSFSDRAVNIVDEGFDMAIRIGTLSDSSLVARKLSEVHVRIAASPVYLEQFGTPQ 179

Query: 180 TPCELTQHNCLFYSYFQDGVEWSFHSPDGMQR---VQPKGNYQVNNSDAINQACLDGLGI 236
               + QH C+  + F+D   W F S DG      V  +G  +  N++A  QA + GLGI
Sbjct: 180 HWRNMAQHQCIIDTNFRDPRHWPFTSGDGSSEIVTVPVRGRLRFANTEACLQAAIAGLGI 239

Query: 237 ANLPRFIVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLM 289
           A LP FI  P LQ G +  LL ++  P  G++AVYP  ++ P +  +LI+FL+
Sbjct: 240 ARLPGFIAAPALQRGEIVRLLENFETPPLGLFAVYPPARHLPHRARLLIDFLV 292