Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 299 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  250 bits (639), Expect = 2e-71
 Identities = 127/285 (44%), Positives = 177/285 (62%)

Query: 10  FVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDAGARYFEYI 69
           F+ V + GSF  A + LG+SK+A+S+ + +LE  LG +L+QRTTR LSLT+AGA Y E  
Sbjct: 10  FIAVADLGSFVKAAEALGISKAAVSRTVLELEARLGSRLMQRTTRRLSLTEAGALYLERC 69

Query: 70  RPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPDIQLQMQMDD 129
           +  V   +E  D +S     P G LRI+ P+ FG L++APL   FL+R+P+I L + + D
Sbjct: 70  KQIVAALEEADDLLSSGSAKPTGLLRINAPLTFGVLHLAPLWPMFLERHPEISLDITLSD 129

Query: 130 KITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTPCELTQHNC 189
           +I D+I  G+D+AIRI  L DS+L+ RK+      +CASPAYL  HG P  P EL QH  
Sbjct: 130 RIVDIIDEGYDMAIRIARLSDSTLVHRKLTSTSLHVCASPAYLDAHGTPAHPHELAQHQT 189

Query: 190 LFYSYFQDGVEWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIANLPRFIVEPDLQ 249
           + YSY Q   EW F+ P+G   V+      VNN D+  QA L G+GI   P F+++  L+
Sbjct: 190 ISYSYNQSKDEWQFNGPEGPVSVRVSSRLHVNNGDSCVQAALGGIGITRQPTFMIDQYLR 249

Query: 250 TGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLMAKLGQ 294
           +G L ++L DY  PE GIYAVYP R + P K+  +++FL     Q
Sbjct: 250 SGQLVSILGDYGAPELGIYAVYPSRAHLPAKMRAMLDFLTEAFAQ 294