Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 318 a.a., LysR family transcriptional regulator from Dyella japonica UNC79MFTsu3.2

 Score =  207 bits (527), Expect = 2e-58
 Identities = 111/289 (38%), Positives = 169/289 (58%), Gaps = 1/289 (0%)

Query: 1   MEHFSALPIFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTD 60
           ME F+A+  FV VVE  SF+ A  +LG++ S +S+ +S+LE+ LG +LL R+TRSL LTD
Sbjct: 1   MEDFAAISAFVRVVEARSFAAAAVQLGMTPSGVSRAVSRLEERLGARLLFRSTRSLRLTD 60

Query: 61  AGARYFEYIRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPD 120
            GA +    +  +    E  +A++   + P G LR+ + +  GR  + P + EF +RYPD
Sbjct: 61  DGAAFHARCKEILADLAEATEALNYATRKPTGRLRVGISLAVGRAAVIPRLDEFERRYPD 120

Query: 121 IQLQMQMDDKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMT 180
           I+L++ M D   DL   G D AIR+GEL DSSLIARKI    +V+CASP YL ++G P +
Sbjct: 121 IRLELSMSDSPADLNEEGIDCAIRVGELEDSSLIARKIGYLRNVVCASPEYLAKYGAPRS 180

Query: 181 PCELTQHNCLFYSYFQDGV-EWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIANL 239
             +L QH C+ Y Y      +W F +P G   V    +  +N+ +++ QA   GLG+   
Sbjct: 181 IEDLKQHRCINYVYPNGRPRQWQFDTPSGQVGVDVDAHLLINDGESVIQAAAAGLGVTQA 240

Query: 240 PRFIVEPDLQTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFL 288
           P  ++   L  G L+ ++TD       ++ VYPQ+K+   +V   IE++
Sbjct: 241 PHMLLCCMLDKGMLELVMTDTISTGKPVWIVYPQKKHLSARVQAFIEWV 289