Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  211 bits (538), Expect = 1e-59
 Identities = 107/286 (37%), Positives = 166/286 (58%), Gaps = 1/286 (0%)

Query: 9   IFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDAGARYFEY 68
           IFV  V+  +F+ A  +L LSK  +S+R+  LE+ LG+QLL R TR L++TD G  ++E 
Sbjct: 8   IFVATVDAHNFTAAANRLSLSKQFVSRRVMALEETLGVQLLIRNTRKLAVTDLGQEFYER 67

Query: 69  IRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPDIQLQMQMD 128
            +  +   ++   A+S  +  PRG LR+S PM FG  +++PL+A FL+ + D++ +M++ 
Sbjct: 68  AKRILGEVEDAEQAMSLRRAGPRGLLRVSAPMSFGMAHLSPLVAMFLREHGDVRFEMELS 127

Query: 129 DKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTPCELTQHN 188
           D+  D++  GFD+AIRIG LPDS+LI +K+     V C SP Y+ + G P  P +L +H+
Sbjct: 128 DRTVDVVGEGFDMAIRIGSLPDSTLIGQKLVDIRMVACCSPGYVRRRGAPKVPGDLERHS 187

Query: 189 CLFYSYFQDGVEWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIANLPRFIVEPDL 248
           CL Y +    V W F      + V+  G  + NN + +  A + GLGI  LP FIV   L
Sbjct: 188 CLLYGH-GGAVSWEFVVDGVTKGVEVHGPLRANNGELVRDAAVAGLGIVRLPDFIVADAL 246

Query: 249 QTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLMAKLGQ 294
           ++G L  +L  +      +YAVYPQ +     +   +EFL   L +
Sbjct: 247 KSGQLVPVLEAFLPSATSVYAVYPQHRQSSLTIRAFVEFLREHLSK 292