Pairwise Alignments

Query, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 313 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  214 bits (544), Expect = 3e-60
 Identities = 114/286 (39%), Positives = 165/286 (57%), Gaps = 4/286 (1%)

Query: 9   IFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDAGARYFEY 68
           +FV      + S AG++ GLS +  S RI+QLE+ LG +LL RTTR +SLT  G  +   
Sbjct: 21  LFVRAALLANVSAAGREFGLSAAVASSRIAQLEKLLGARLLHRTTRRISLTQDGEVFMTR 80

Query: 69  IRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPDIQLQMQMD 128
               +        ++   Q  P+G LR+S+P  FGR +++P+I+EFL+RYP + + +++ 
Sbjct: 81  AEALLDAAAAARASVGRAQAEPQGRLRVSMPSSFGRQHVSPVISEFLRRYPGVSVDLRLT 140

Query: 129 DKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTPCELTQHN 188
           D++ DL+  G D+AIR+G L DSSL+AR++A    V+CA+PAYL   G P  P +L QH 
Sbjct: 141 DQVVDLVDAGIDVAIRVGVLKDSSLVARRLAVNRRVLCAAPAYLAARGTPHHPSDLAQHE 200

Query: 189 CLFYSYFQDGVEWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIANLPRFIVEPDL 248
           C+  S   D  +W+F +P G   V+  G    +N + I  A L G GIA    + V P L
Sbjct: 201 CMILS---DQRDWAFVTPAGPLAVRVSGRLVTDNGEVIRDALLAGFGIALKSTWDVAPYL 257

Query: 249 QTGHLQALLTDYPLPEH-GIYAVYPQRKYQPTKVTVLIEFLMAKLG 293
           ++G L  +L  YPL E   I+AVYP R + P K    IEFL    G
Sbjct: 258 RSGELVGVLDSYPLAESVAIWAVYPSRSFVPPKTLAFIEFLATHFG 303