Pairwise Alignments

Query, 92 a.a., DNA-directed RNA polymerase, omega subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 118 a.a., DNA-directed RNA polymerase, omega subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 57.4 bits (137), Expect = 5e-14
 Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 4/92 (4%)

Query: 1  MARVTVEDAVEQIGNRFDMILVAARRARQIAVQGKDPMVEEMNDKPTVIALREIELGLVN 60
          MARVTVED V+++ NRF+++++AA RAR+I+  G +  ++  NDK  V++LREI     +
Sbjct: 1  MARVTVEDCVDKVPNRFELVMLAAHRAREISA-GSELTIDRDNDKNPVVSLREIAEETQS 59

Query: 61 AHTLD---ADERQTVREREAAEIAAVAAIAEG 89
          A  L     +  QT  E +  E  ++A +  G
Sbjct: 60 ADALRERLIESNQTQIEVDEPEEDSMAMLMGG 91