Pairwise Alignments

Query, 701 a.a., guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 714 a.a., (p)ppGpp synthetase I, SpoT/RelA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  486 bits (1251), Expect = e-141
 Identities = 272/686 (39%), Positives = 416/686 (60%), Gaps = 13/686 (1%)

Query: 22  LLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLDHETLMAALLHDTIEDTYVT 81
           L++ AY   R+ H GQ+R SGE Y THPVAVA ILAE RLD  T++ ALLHDT+EDT  T
Sbjct: 30  LIEAAYDYGREMHRGQLRHSGEEYFTHPVAVAAILAEQRLDDSTIITALLHDTVEDTRST 89

Query: 82  KEDLAERFGESVAELVEGVSKLDKLKFRDKKEAQAENFRKMMMAMTQDIRVILIKLADRT 141
             +L  +FG  +AELV GV+ L  L+   ++  QAENFRK+ MAM++D+RVIL+KLADR 
Sbjct: 90  FAELESQFGREIAELVNGVTNLTNLQLSSRETKQAENFRKLFMAMSKDLRVILVKLADRL 149

Query: 142 HNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHNIKTELEDLGFQAYYP-MRYRVLKE 200
           HNMRT+  +  +K+ + ARET++IYAP+A R+G+  ++ ELEDL F+   P  R  +++ 
Sbjct: 150 HNMRTIKHMPVEKQVKKARETMDIYAPLAGRMGMQWMRDELEDLSFRVLNPDGRQSIMRR 209

Query: 201 VVKAARGNRKELIQGIEAAVLTRLNDAGIKGKVKGREKNLYSIYNKMQSKELQFQEVMDI 260
            +K  +    +++Q I + +   L+  GI+  V GR K  YSI+ KM++K+L F  + DI
Sbjct: 210 FIK-LQNETGDVVQKITSDIRKELDAHGIEADVYGRAKKPYSIWRKMEAKQLGFSRLSDI 268

Query: 261 YAFRVIVDSIDTCYRVLGAMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVPVEI 320
           Y FRVI  S D CY VLGA+H  ++  PGRFKDYI+ PK+NGY+S+HT++ G  G  VE+
Sbjct: 269 YGFRVITHSEDDCYGVLGAIHQRWRAVPGRFKDYISQPKSNGYRSIHTTVSGRDGKRVEV 328

Query: 321 QIRTEDMDQMADKGVAAHWAYKGGAETGQGTTTQVRARKWMQSLLELQQSASTSFEFVEN 380
           QIRT  M ++A+ GVAAHW+Y+ G +        V   +W+ SL E  +S+    EF+E+
Sbjct: 329 QIRTRQMHEVAEAGVAAHWSYRDGVQV--ENPFAVDPAEWIASLSERFESSEDHGEFLEH 386

Query: 381 VKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLI 440
           VK E++ ++++ FTP+G +++LP  AT +D+AY +HT +G++CVGA+V+    PL   L 
Sbjct: 387 VKLEMYSDQVFCFTPKGEVVKLPKGATPLDYAYGIHTRIGDSCVGAKVDGIRVPLWTRLK 446

Query: 441 SGQTVEIITAKGARPNAAWLNFVVTGKARAKIRQVLKSLKGDDAIALGRRLLNHA---LG 497
           +GQ+VEIITA G RP A W++ VVTG+A+  IR+ L+       + LG+ L   A   +G
Sbjct: 447 NGQSVEIITADGQRPQATWIDIVVTGRAKQAIRRSLREEDRARFVKLGQELARVAFDHVG 506

Query: 498 KTKLDSIPAEQIEKVVRDTKHASLNAL-LADIGLGNAMSIVIAQRLIGDNLENQESRDSH 556
           K   D        ++    +   L+AL  ADI   + + ++  + L G    ++ + D  
Sbjct: 507 KRVTDKALKTAAHQLGYGGRLELLSALGSADISARDVVEVLYPE-LQGQG-GDEVAADRA 564

Query: 557 QMPIRGAEGMLVTFANCCRPIPGDAVIAHVSQGKGLVVHMENCANIRGYQSEPDKYIPVQ 616
            + +   +      A CC+P+PG+ ++    +G G+ VH  +C  +  ++ E  ++I +Q
Sbjct: 565 VVGLHSDQSF--ERARCCQPVPGERIVGIAYRGHGVRVHAIDCPALEEFEDEMRRWIDLQ 622

Query: 617 WDNVEGVEYQA-NLRVEIVNHQGALAKITSIIAAEGSNIHNLSTEERDGRVYLINLRISV 675
           W +       A  L V I N QG L +I ++I  + +NI +L   +R    Y + L + V
Sbjct: 623 WHSGRHAAVHAVRLDVTIGNDQGVLGRICTLIGEQRANISDLHFVDRKPDFYRLLLEVEV 682

Query: 676 KDRIHLANVMRRIRVLPEVLRTSRNR 701
           +D  HL  VM  ++   +V    R+R
Sbjct: 683 RDLEHLHRVMTAVQADTDVAGLERHR 708