Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 219 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score = 93.6 bits (231), Expect = 2e-24
 Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 11/209 (5%)

Query: 1   MKILLAEDQAMVRGALAALL-TLAGGFTITQASDGDEALTLLKQQHFDLLLTDIEMPGRT 59
           MKILL +D A+VR   A+LL  L    T+++A+ G++AL  ++Q    L++ D+ +PG +
Sbjct: 1   MKILLVDDHAVVRQGYASLLKALLPEVTVSEAASGEQALEQVQQSIPSLVVLDLGLPGIS 60

Query: 60  GLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAG 119
           GLE    L+++     V++ +       +++A++AG  G+L K    + LV ++++V+AG
Sbjct: 61  GLETCRRLRQRLPLMPVLIFSMHDELALVRQALDAGASGYLTKRCAPDVLVEAVRKVLAG 120

Query: 120 KRVIDPELA----------MMAIGDIDPLNDKERRALRFASEGKSTAEIADMLFIAEGTV 169
           +  I+  LA            A G +  +  +E       + G    EIA+ L I+  TV
Sbjct: 121 QTFIEQPLATDLACQRPSHSPAKGRLAEMTPREMEIFIMLARGIGNREIAERLCISSKTV 180

Query: 170 RNYLSEAIAKLNASNRIDAARIAKQKGWL 198
            N+++   +KL  S++ +   +A   G L
Sbjct: 181 SNHMALLKSKLGVSSQAELVHLAIDLGLL 209