Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 210 a.a., Two-component system regulatory protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  122 bits (305), Expect = 6e-33
 Identities = 76/197 (38%), Positives = 110/197 (55%), Gaps = 9/197 (4%)

Query: 1   MKILLAEDQAMVRGALAALLTLAGGFTITQASDGDEALTLLKQQHFDLLLTDIEMPGRTG 60
           ++I LA+DQ +VR AL ALL   G   + +A DG   L  L   + D++L+DI MPG  G
Sbjct: 4   LRIALADDQVLVRAALRALLQQQGITVVCEADDGQALLDALATHNVDVVLSDIRMPGLDG 63

Query: 61  LELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAGK 120
           +     L+ +  +T V+++TTF  +  + RA EAG  GFLLKDA  + L  +I +V AG+
Sbjct: 64  IAALEQLRARGDRTPVLLLTTFDDSELLLRACEAGAQGFLLKDAAPDDLHEAIARVAAGE 123

Query: 121 RVI-----DPELAMMAIGD----IDPLNDKERRALRFASEGKSTAEIADMLFIAEGTVRN 171
            ++     DP  A     D     +  N++E   LR  + G S  EIA  LF+AEGTV+N
Sbjct: 124 TLLQPVSTDPVRARYQFRDQQAPRETFNEREVAILRLLAGGYSNKEIARTLFLAEGTVKN 183

Query: 172 YLSEAIAKLNASNRIDA 188
           Y+S  + KL   +R  A
Sbjct: 184 YVSTILDKLGTRDRTRA 200