Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 214 a.a., two-component system response regulator UvrY from Vibrio cholerae E7946 ATCC 55056

 Score = 97.1 bits (240), Expect = 2e-25
 Identities = 56/208 (26%), Positives = 108/208 (51%), Gaps = 10/208 (4%)

Query: 1   MKILLAEDQAMVRGALAALLTLAGGFTIT-QASDGDEALTLLKQQHFDLLLTDIEMPGRT 59
           + + L +D  +VR  +  ++    G  +  +A  G+EA+   +  H D++L D+ MPG  
Sbjct: 2   ISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRTNHADVILMDMNMPGIG 61

Query: 60  GLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAG 119
           GLE    L   +   K++V+T      +  + ++AG  G+L K A  + +V++I+ V +G
Sbjct: 62  GLEATKKLLRVNPDIKIIVLTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHSG 121

Query: 120 KRVIDPELA-MMAIGDIDP--------LNDKERRALRFASEGKSTAEIADMLFIAEGTVR 170
           +R I PE+A  MA+    P        L+++E + +   ++G+   +I++ L ++  TV 
Sbjct: 122 QRYISPEIAQQMALSQFSPASENPFADLSERELQIMLMITKGQKVTDISEQLSLSPKTVN 181

Query: 171 NYLSEAIAKLNASNRIDAARIAKQKGWL 198
           +Y     AKLN +  ++   +A + G L
Sbjct: 182 SYRYRLFAKLNINGDVELTHLAIRHGIL 209