Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 223 a.a., response regulator transcription factor from Rhodopseudomonas palustris CGA009

 Score =  101 bits (252), Expect = 9e-27
 Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 14/212 (6%)

Query: 1   MKILLAEDQAMVRGALAALLTLAGGFTIT-QASDGDEALTLLKQQHFDLLLTDIEMPGRT 59
           +++ +A+D  +V   + AL+    G  +  +ASDG  AL    +   D+ + D+ MPG  
Sbjct: 9   LRVFIADDHPVVLSGMKALVAGDPGLEVVGEASDGPNALRRATELKPDVAVLDLSMPGLN 68

Query: 60  GLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAG 119
           G+E+A          +V+V+T      Y+++ ++ GV G++LK + +E L+  I  V +G
Sbjct: 69  GIEVARKFLATCPDCRVLVLTVHEDGAYLRQLLDLGVAGYVLKRSATEELIRGIHAVGSG 128

Query: 120 KRVIDPELAMMAIGDIDP-------------LNDKERRALRFASEGKSTAEIADMLFIAE 166
              +DP +A  AIG   P             L+ +E   LR A+ G S   IA  L I  
Sbjct: 129 GIYLDPAIAGRAIGRTTPHLHNGDEHNAVSELSTREIEVLRLAAIGHSNKTIAAKLQIGA 188

Query: 167 GTVRNYLSEAIAKLNASNRIDAARIAKQKGWL 198
            +V  Y +  +AKL   NR++  R A   GWL
Sbjct: 189 KSVETYKARGMAKLGFHNRVEVVRFALSMGWL 220