Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 208 a.a., DNA-binding response regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score = 95.1 bits (235), Expect = 8e-25
 Identities = 53/204 (25%), Positives = 110/204 (53%), Gaps = 6/204 (2%)

Query: 1   MKILLAEDQAMVRGALAALLTLAGGFTITQA-SDGDEALTLLKQQHFDLLLTDIEMPGRT 59
           ++I+L ED  ++R    +LL+    F +  A +  D A   L+  H D++L DI+MPG  
Sbjct: 5   LRIVLIEDDDILRMGYESLLSDVDDFVVVNAYASYDLARKHLEADHPDVILLDIQMPGTN 64

Query: 60  GLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAG 119
           GL+   ++K+      ++++T F     +  A+  G GG+L K++ +  ++ ++++V  G
Sbjct: 65  GLQALPFIKKTLPTANIIILTVFDSPELVFEALTMGAGGYLTKNSSASKIIDAVREVSTG 124

Query: 120 KRVIDPELAMMAIGDI-----DPLNDKERRALRFASEGKSTAEIADMLFIAEGTVRNYLS 174
              +   +A + +         PL  +E   L   + G++ ++IA+ LFI + TVR+++ 
Sbjct: 125 GGAMSTNVARIVMHSFQKNLNSPLTKRETEILDRIANGQTKSQIANDLFIDQETVRSHVK 184

Query: 175 EAIAKLNASNRIDAARIAKQKGWL 198
               KL+ +++ +A + AK+K ++
Sbjct: 185 NIYIKLDVNSKSEAIKTAKEKRFI 208