Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 216 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 92.4 bits (228), Expect = 5e-24
 Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 16/214 (7%)

Query: 1   MKILLAEDQAMVRGALAALLTLAGGF-TITQASDGDEALTLLKQQ-HFDLLLTDIEMPGR 58
           + I+LA+D  ++R +L AL+    G   + + SDG   L LL++  + D++L+DI MP  
Sbjct: 2   INIILADDHHIIRTSLKALIEKHEGIKVVAEVSDGLAVLELLEKGINADIILSDIVMPRL 61

Query: 59  TGLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMA 118
            G+ LA+ +KE+   TKVVV++      Y   A  +G   +L KD   + L+  +Q VM 
Sbjct: 62  DGIALASTIKERGYTTKVVVLSILDDEKYASNAFISGAFAYLSKDIEEDELLFCLQHVMK 121

Query: 119 GKRVIDPELAMMAIGDIDP--------------LNDKERRALRFASEGKSTAEIADMLFI 164
           GKR +   L +  +   +                +++E   L+  ++G +  EIAD L++
Sbjct: 122 GKRYLSSNLCISILERFNTQLNMLSQKMNTEINFSEREINVLKLIADGLTNQEIADKLYL 181

Query: 165 AEGTVRNYLSEAIAKLNASNRIDAARIAKQKGWL 198
           +  TV +     I+K    N     R A + G++
Sbjct: 182 SRRTVESQREALISKTGTKNSASLVRFAMRNGYV 215