Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 229 a.a., response regulator (RefSeq) from Shewanella loihica PV-4

 Score = 91.7 bits (226), Expect = 9e-24
 Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 10/202 (4%)

Query: 1   MKILLAEDQAMVRGALAALLTLAGGFTIT-QASDGDEALTLLKQQHFDLLLTDIEMPGRT 59
           + + L +D  +VR  +  +L    G  +  +A DG+ A+   +    D++L D+ MPG  
Sbjct: 17  ISVFLVDDHELVRTGIRRILEDERGIKVVGEAGDGESAVQWCRNNEADVILMDMNMPGIG 76

Query: 60  GLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAG 119
           GLE    +    S  K++V+T      +  + ++AG  G+L K A    ++ +I+QV  G
Sbjct: 77  GLEATRKILRYQSHAKIIVLTIHTEDPFPTKVMQAGASGYLTKGATPPEVIQAIRQVAHG 136

Query: 120 KRVIDPELA-MMAIGDID--------PLNDKERRALRFASEGKSTAEIADMLFIAEGTVR 170
           +R + PE+A  MA+   +         L+++E + +   + G+  ++I++ L ++  TV 
Sbjct: 137 QRYLSPEIAQQMALSQFNQSEDNPFKSLSERELQIMMMITNGERVSDISEQLNLSPKTVN 196

Query: 171 NYLSEAIAKLNASNRIDAARIA 192
           +Y     AKL  S  ++  R+A
Sbjct: 197 SYRYRLFAKLGISGDVELTRLA 218