Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 209 a.a., response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Dechlorosoma suillum PS

 Score =  106 bits (265), Expect = 3e-28
 Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 1   MKILLAEDQAMVRGALAALLTLAGGFTIT-QASDGDEALTLLKQQHFDLLLTDIEMPGRT 59
           ++ILLA+D ++VR  L  LL       +  +AS G E LT L+Q   DLLL D+ MPG +
Sbjct: 2   IRILLADDHSIVRSGLKQLLATEADLEVAGEASQGSEVLTRLRQGGIDLLLMDMSMPGIS 61

Query: 60  GLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAG 119
           GL+L      +  +  VVV++    +  + RA+ AG  G++ KD+    L+++I++V  G
Sbjct: 62  GLDLIRRAHTEAPEVPVVVLSMHNESQLVSRALRAGASGYVTKDSDPAILLAAIRKVARG 121

Query: 120 KRVIDPELA-MMAIG------DIDPLNDKERRALRFASEGKSTAEIADMLFIAEGTVRNY 172
            R IDP L   M  G        + L+D+E   L+  S+G + A + + L ++  TV  +
Sbjct: 122 GRFIDPALVDAMVFGAPEEAPPHEALSDREFEVLQLLSQGLALAAVGERLHVSAKTVSTH 181

Query: 173 LSEAIAKLNASNRIDAARIAKQKG 196
            +  + KL   N  +  R A + G
Sbjct: 182 KTRLMQKLGIDNNAELVRYALRHG 205