Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 216 a.a., LuxR family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  101 bits (252), Expect = 9e-27
 Identities = 58/207 (28%), Positives = 112/207 (54%), Gaps = 12/207 (5%)

Query: 2   KILLAEDQAMVRGALAALLTLAGGFTIT-QASDGDEALTLLKQQHFDLLLTDIEMPGRTG 60
           +I+LA+D A+VR  + ALLT   G  +  +ASDG E + ++ Q   DL+L DI M G  G
Sbjct: 4   RIMLADDHALVRSGIKALLTAMPGVEVVGEASDGAEVIEMIPQLKPDLVLLDIAMKGMNG 63

Query: 61  LELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAGK 120
           LE    L+ ++   + ++++ +G   Y+ +A+ AG  G+L KD+ +  L  ++ +V  G+
Sbjct: 64  LEALRRLRGEYPTIRFLMLSMYGSEEYVMQALNAGANGYLFKDSAATELEKALYEVKHGR 123

Query: 121 RVIDPELAMMAIGD-----------IDPLNDKERRALRFASEGKSTAEIADMLFIAEGTV 169
           + +D  ++  A+ +           ++ L  ++R  L+  +EG +T EIA  L ++  T+
Sbjct: 124 QYLDSHISREALDNYMKRVAQNGTPVEVLTPRQREILQLIAEGNNTKEIAYQLNVSAKTI 183

Query: 170 RNYLSEAIAKLNASNRIDAARIAKQKG 196
             + ++ + +L+  +     R A + G
Sbjct: 184 ETHRAQLMERLDIRDVPGLVRYAIRTG 210