Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 221 a.a., XRE family transcriptional regulator from Cupriavidus basilensis FW507-4G11

 Score =  103 bits (258), Expect = 2e-27
 Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 18/214 (8%)

Query: 1   MKILLAEDQAMVRGALAALLTLAGGFTIT-QASDGDEALTLLKQQHFDLLLTDIEMPGRT 59
           ++ILL +D ++ R  + ALL     F I  +A+DG E +   KQ   D++L D+ MPG +
Sbjct: 3   IRILLIDDHSLFRSGVRALLARQTDFEIVDEAADGVEGIKRAKQHRPDVILLDLNMPGLS 62

Query: 60  GLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAG 119
           GLE    L E   ++ VV++T   +A  +  A+ +G  G+LLK+  +ETL  +I++  AG
Sbjct: 63  GLETLQLLVEDLPESAVVMLTVSEQAEELAAALRSGARGYLLKNIETETLTGAIRRAAAG 122

Query: 120 KRVIDPEL-----------------AMMAIGDIDPLNDKERRALRFASEGKSTAEIADML 162
           + VI   +                     + D   L  +E   +R  + G+S  EIA  L
Sbjct: 123 EAVISQSMTAKLVAQFRAPTNPAATTAACVSDEPRLTSREHEIVRGLTRGESNKEIAREL 182

Query: 163 FIAEGTVRNYLSEAIAKLNASNRIDAARIAKQKG 196
            +AE TV+ ++   + KLN ++R+  A  A ++G
Sbjct: 183 GVAESTVKIHVQNILKKLNLTSRVQIAVYAVERG 216