Pairwise Alignments

Query, 198 a.a., DNA-binding response regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 215 a.a., response regulator transcription factor from Ralstonia sp. UNC404CL21Col

 Score =  103 bits (258), Expect = 2e-27
 Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 10/202 (4%)

Query: 1   MKILLAEDQAMVRGALAALLTLAGGFTIT-QASDGDEALTLLKQQHFDLLLTDIEMPGRT 59
           +++++A+D A++R  +  +L  AG F +  +ASDG + + L+++    +++ D+ MPGR+
Sbjct: 2   IRVMIADDHAVMRDGVRHILERAGNFEVACEASDGTQVVQLVREHQPQVIVLDLSMPGRS 61

Query: 60  GLELAAWLKEQHSQTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVSSIQQVMAG 119
           GLEL   L + H + +V+V+T      Y+ RA  AG  G+L K++ +  LV+++Q+V  G
Sbjct: 62  GLELLRQLHDDHPRVRVLVLTMHAEEQYVARAFRAGAAGYLTKESAATELVTALQKVANG 121

Query: 120 KRVIDPELAMMAIGDIDP---------LNDKERRALRFASEGKSTAEIADMLFIAEGTVR 170
              + P +A      +           L+D+E    R    G+   EIA  L ++  T+ 
Sbjct: 122 GTYVSPPMAEKLAHSLGEPSEEAAHTRLSDREMEVYRRLVRGEPLTEIATSLCVSAKTIS 181

Query: 171 NYLSEAIAKLNASNRIDAARIA 192
            Y    + KL  S+     R A
Sbjct: 182 TYKMRLMDKLQLSSEAALVRYA 203