Pairwise Alignments

Query, 238 a.a., transcriptional regulator. GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., GntR family transcriptional regulator from Sinorhizobium meliloti 1021

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 20/226 (8%)

Query: 4   VKSLASEKSS-------TTLADQILVQIQTSIIKGELPAGSKINEQALAEKYGISRGPTR 56
           V ++A+E++S       T++ + +   I   ++  ++  G++I    LA + G+S+ P R
Sbjct: 2   VVAIAAERASRGAGIRPTSVVEGVYDSIYHRLMSLDIAPGARIPIDVLARELGVSQTPIR 61

Query: 57  EALQTLERQRLVVRAPHVGARVA-QLTVSELNDLYQLRSVLEGMACELAASRITPEQLAK 115
           EAL  LER+ LV +   +G   A Q T  +  DLY  R ++E  A  LAA+ +TPE L +
Sbjct: 62  EALSRLEREGLVRKEHLIGYSAAPQWTRKQFEDLYAFRLLIEPEAARLAAANMTPEALQQ 121

Query: 116 LEDLLAVQ---ETALANGDTYFQ-EEGDVDFHYQIIQASGNKHLQETLIGGLYHL---LR 168
           LE+  A     E  +     Y +    D  FH +I++ +GN  ++ TL     HL     
Sbjct: 122 LENSAADMGHGEAPVDRNTRYSRFARADAQFHDEILKIAGNDVIRSTLSNQHVHLHIFRL 181

Query: 169 MYRYQCTNKNRPVKAIAEHRRIVEAIAQRDGELASLLMRRHIEQGR 214
           M+  + T      +A+ EH  ++ A   RD + A   MR HIE+ R
Sbjct: 182 MFHIRVTQ-----EALEEHESLLAAFRARDPQAAYDAMRVHIERSR 222