Pairwise Alignments

Query, 238 a.a., transcriptional regulator. GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 222 a.a., GntR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  181 bits (459), Expect = 1e-50
 Identities = 99/217 (45%), Positives = 135/217 (62%), Gaps = 1/217 (0%)

Query: 11  KSSTTLADQILVQIQTSIIKGELPAGSKINEQALAEKYGISRGPTREALQTLERQRLVVR 70
           ++  T AD+   Q++  I++G + AG+K++E  L+  YG+SR   REA+  LE   +V R
Sbjct: 6   QTPVTTADKTFYQLRQDIVEGVIAAGAKLSETELSTTYGVSRAVIREAINRLESCHIVER 65

Query: 71  APHVGARVAQLTVSELNDLYQLRSVLEGMACELAASRITPEQLAKLEDLLAVQETALANG 130
             +VGARV  L+   L  LY++R  LEGMA  LAA  ++ E++A+LE LL      +  G
Sbjct: 66  RANVGARVVALSEEGLLALYEIRESLEGMAARLAAKNMSDEEVAELEALLVSHFQDVKQG 125

Query: 131 DTYFQEEGDVDFHYQIIQASGNKHLQETLIGGLYHLLRMYRYQCTNKN-RPVKAIAEHRR 189
           ++Y+QE GDVDFHY+II  S NKHL   L  G+YHL+RMYR Q      R   A  EHR 
Sbjct: 126 ESYYQEAGDVDFHYRIILGSKNKHLISMLFDGIYHLVRMYRVQLGMAGPRVTTAYDEHRH 185

Query: 190 IVEAIAQRDGELASLLMRRHIEQGRKNTELRLIELQA 226
           IV+AIA RD ELA +LMRRHI   R N   +L  +Q+
Sbjct: 186 IVQAIANRDQELAEMLMRRHITYSRNNIRNKLSSIQS 222