Pairwise Alignments

Query, 238 a.a., transcriptional regulator. GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 218 a.a., transcriptional regulator, GntR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 95.1 bits (235), Expect = 1e-24
 Identities = 73/205 (35%), Positives = 100/205 (48%), Gaps = 5/205 (2%)

Query: 14  TTLADQILVQIQTSIIKGELPAGSKINEQALAEKYGISRGPTREALQTLERQRLVVRAPH 73
           T  AD I  +++  I+ G    G ++NE  LAE +G+SR P REA   L    LV + P 
Sbjct: 3   TRRADTIAQELENMILTGGFSDGDRLNEIKLAEHFGVSRTPIREAFYHLGTAGLVEQIPR 62

Query: 74  VGARVAQLTVSELNDLYQLRSVLEGMACELAASRITPEQLAKLEDLLAVQETAL--ANGD 131
            G  V      EL  L++  + LE     LAA RI+   L  LE   A  E A+  A+ D
Sbjct: 63  RGVFVRHPGPMELIALFEYMAELEAACGRLAAPRISDAALDDLEQANATCEAAVEAADSD 122

Query: 132 TYFQEEGDVDFHYQIIQASGNKHLQETLIGGLYHLLRMYRYQCTNKNRPVKAIAEHRRIV 191
            Y++E  +  FH+ I   SGN  LQ  +I     L    R Q   + R  +++AEHR IV
Sbjct: 123 GYYRE--NERFHHIIYAESGNSFLQNDVIRLHKRLKPFRRIQLQLRGRLSQSMAEHRAIV 180

Query: 192 EAIAQRDGELASLLMRRHIE-QGRK 215
            A+A  D   A   +R H+  QG K
Sbjct: 181 AALAAGDAIAAGEALRSHVAVQGEK 205