Pairwise Alignments

Query, 238 a.a., transcriptional regulator. GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 223 a.a., DNA-binding transcriptional regulator, GntR family from Paraburkholderia bryophila 376MFSha3.1

 Score =  135 bits (341), Expect = 5e-37
 Identities = 81/220 (36%), Positives = 127/220 (57%), Gaps = 4/220 (1%)

Query: 18  DQILVQIQTSIIKGELPAGSKINEQALAEKYGISRGPTREALQTLERQRLVVRAPHVGAR 77
           D+I  QI+  I++G +  G K++E  +A++ G+SRGP REA++TLE +RLV R P+ G R
Sbjct: 5   DEIADQIEEMIVEGVIFPGEKLSEVLIAQQLGVSRGPLREAIRTLEGRRLVRRTPNSGVR 64

Query: 78  VAQLTVSELNDLYQLRSVLEGMACELAASRITPEQLAKLEDLLAVQETALANGDTYFQEE 137
           VA L+V ++  +  +R  LEGM+   AA  ++  QL  L+  L       ++   + Q  
Sbjct: 65  VANLSVEDIGQVLSVREALEGMSARQAAENMSLPQLNALKASLLEMRRLGSSNQAFRQGV 124

Query: 138 GDVDFHYQIIQASGNKHLQETLIGGLYHLLRMYRYQCTNKNRPVKAI-AEHRRIVEAIAQ 196
            D DFH QI + S N+ L++ L   LY LLR+ R+Q  +  R  + +  EH  IV+ I +
Sbjct: 125 HDNDFHVQIAKGSHNQWLEDILCRDLYALLRVIRFQAVSVGRGFQEVFGEHELIVDRIEK 184

Query: 197 RDGELASLLMRRHIEQGRKNTELRLIELQANAAAKETLAN 236
           RD E A   MRRHI  GR   +  + +L+   +A++ L +
Sbjct: 185 RDPEGAEAAMRRHIALGR---DALIEQLRDGTSARKKLVS 221