Pairwise Alignments

Query, 292 a.a., methylisocitrate lyase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 292 a.a., isocitrate lyase family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  177 bits (449), Expect = 3e-49
 Identities = 105/260 (40%), Positives = 147/260 (56%), Gaps = 10/260 (3%)

Query: 23  GTTNAYFALMAEQTGFQALYLSGAGVANASYGLPDLGMTSMNDVLIDAGRITSATQLPLL 82
           G  +A  A +AE  GF ALYLSGA V+    G PD+G+TS+ ++      I      P++
Sbjct: 21  GVYDALTASLAEAAGFPALYLSGAAVSYTRLGRPDIGLTSVTEMTETLSLIRDRVSTPII 80

Query: 83  VDIDTGWGGAFNIARTIKEFEKIGVAAVHMEDQVSQKRCGHRPNKAVVSTEEMVDRIKAA 142
           +D DTG+G A N  RT++ +E+ G  A+ +EDQ   KRCGH  +K ++  +EM  +I+A 
Sbjct: 81  IDADTGFGNALNAQRTMRLYERAGANALQIEDQAYPKRCGHLADKTLIPAQEMAGKIRAM 140

Query: 143 VDARTDPNFVIMARTDAVAVEGLEAGIERAKAYIAAGADMIFAEA------LTELDQYRH 196
            DAR     +I+ARTDAVAVEG EA  ERA+ Y+ AGAD++F EA      LT + Q   
Sbjct: 141 ADARHAAQTLIIARTDAVAVEGFEAAQERAETYLEAGADILFIEAPQSEAQLTAIAQ--R 198

Query: 197 FKAQVKAPILANMTEFGQTQLFNKEELAQAGADMVLYPLGTFRAANQAALKVMQALMNDG 256
           F+ +V  P+LANM E G+T + +  EL   G  +V++P G  RA  + A     +L   G
Sbjct: 199 FRGRV--PLLANMVEGGETPMKSARELEALGYALVIFPGGIVRALARTAEAYYLSLSETG 256

Query: 257 HQRNVLDTMQTRADLYKYLG 276
                 D M    DL   LG
Sbjct: 257 SNAAFRDRMFDFQDLNARLG 276