Pairwise Alignments

Query, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 714 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  458 bits (1178), Expect = e-132
 Identities = 229/553 (41%), Positives = 353/553 (63%), Gaps = 1/553 (0%)

Query: 952  IENELVLSSQVLNSMNEAVVVAGLDYRIRSVNPAFSAITGYSEGQISDKFLIHLAYSRQQ 1011
            +E+E  L++ V ++ +EA+++   + RI  VNPAF+ ITG+S G++  +    L    Q 
Sbjct: 149  LESEHRLATTVFHASSEAIMITDAENRIVDVNPAFTRITGFSRGEVLGRNPRILQSGIQS 208

Query: 1012 RDLFNSIEQQLLRHKHWAGEIWIRNKARRAILVWLEINQVIDVKGETSHFVAVFTDITER 1071
               +  +   + ++ HW GEIW R +       WL +++V+  +G   ++VA+++DI+ER
Sbjct: 209  EHFYREMWAAINQYGHWRGEIWNRRRNGELYPEWLAVDRVLSPEGAVLNYVAMWSDISER 268

Query: 1072 KKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFLDLDRFKHINDSM 1131
            K+AE  + +LA +D LT LPNR LF DR   A+  A R +  VAL+F+DLDRFK +ND++
Sbjct: 269  KEAEARIHYLAHYDALTDLPNRVLFNDRFTQALIHARRYDQSVALMFVDLDRFKVVNDTL 328

Query: 1132 GHHIGDLLLKAVAHRLQSAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKVLKAFQA 1191
            GH +GD LLK VA RL+  VRE DTV+R GGDEF ++L  +  +  A ++S+K+L+A   
Sbjct: 329  GHRVGDELLKQVAERLRRCVREEDTVSRQGGDEFVVLLANLDMSADAAVVSDKILEALAE 388

Query: 1192 PFLLDDKSLNISTSIGISLYPNDAKDVDSLIKFADTAMYHAKALGRNNFQFYTNKLNEMA 1251
            P   +   L+++ SIGI+ YP+D  D D+L+K AD AMY AK++GRNN+QF++ +L + A
Sbjct: 389  PMYFEGHELSVTCSIGIACYPSDGADPDTLMKNADLAMYRAKSVGRNNYQFFSPELEQGA 448

Query: 1252 TRHMQLETGLKQAISHNELSLVYQPKFCLRNGSLTGLEALLRWQHSELGPISPAEFIPLA 1311
               + LE  +++A+  +E  L Y P+    +G L  LEAL+RWQH E G + P++FIPLA
Sbjct: 449  LTRLTLENAMRRALDRDEFELHYLPQVDNPSGRLLSLEALIRWQHPERGLLLPSQFIPLA 508

Query: 1312 EETGMINQIGHWVINQSCQQLAEWNELGFSDISMAVNLSARQLK-ADIISTIEVALAVSG 1370
            EE+G++  I  WV+ +  +QLA+W     + + +A+NL   QL+  D    +   L+  G
Sbjct: 509  EESGLVLPISLWVLRRVARQLADWRRQNLTLVPVAINLCEAQLRQPDFAEALGRILSEEG 568

Query: 1371 LPAKALELELTESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLK 1430
            +  + +ELE TE  +M + + ++ +LS LK LG+ I +DDFG GYS+L+ L+R P+DTLK
Sbjct: 569  VEGRWIELEFTEGALMHDTERNLRVLSALKRLGVGITLDDFGVGYSNLNVLRRLPVDTLK 628

Query: 1431 IDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNFLALQGCDQVQGFLL 1490
            IDR  V D+T + DDA I  AII++A S+ L VVAEGVET +Q  F   + C ++QG   
Sbjct: 629  IDRSLVTDVTRNEDDAVIVDAIISMAQSMNLKVVAEGVETADQAGFFKARACAEIQGHFF 688

Query: 1491 SKPLSAQDCQTLL 1503
            SK + A +   +L
Sbjct: 689  SKAIGAVEVAAML 701