Pairwise Alignments
Query, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1
Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS
Score = 522 bits (1345), Expect = e-152
Identities = 278/564 (49%), Positives = 370/564 (65%), Gaps = 2/564 (0%)
Query: 945 NITSRKLIENELVLSSQVLNSMNEAVVVAGLDYRIRSVNPAFSAITGYSEGQISDKFLIH 1004
+IT+R E EL L+ +V + EA+++ RI SVN AF ITGY++ ++ +
Sbjct: 713 DITARHRAEAELKLAEKVFANSPEAIMICDQGNRIISVNRAFCDITGYAQEEVLGQDPRM 772
Query: 1005 LAYSRQQRDLFNSIEQQLLRHKHWAGEIWIRNKARRAILVWLEINQVIDVK-GETSHFVA 1063
LA R +D + + + L WAGEIW R K W+ IN V D + G +H++
Sbjct: 773 LASGRHDKDFYRQMWEILRDTGAWAGEIWDRRKNGEIYPKWMTINAVHDTQSGALTHYIT 832
Query: 1064 VFTDITERKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFLDLDR 1123
+F+DITERK+ E + LA D LTGLPNR + RL +++ A R + VA++F+DLDR
Sbjct: 833 LFSDITERKETEARIHHLAHHDPLTGLPNRFTLEARLEQSLADARRHGHKVAVMFMDLDR 892
Query: 1124 FKHINDSMGHHIGDLLLKAVAHRLQSAVREGDTVARLGGDEFTIILEGVAKTKAATLISE 1183
FK INDS+GH +GD LL +AHRL+SAVRE DTVARLGGDEF ++L V A ++
Sbjct: 893 FKTINDSLGHAVGDSLLMEIAHRLRSAVRESDTVARLGGDEFVVVLPDVEGANDAAHVAG 952
Query: 1184 KVLKAFQAPFLLDDKSLNISTSIGISLYPNDAKDVDSLIKFADTAMYHAKALGRNNFQFY 1243
K+++ + L+ S SIGISLYP+D + V ++++ ADTAMYHAKA+GRNNFQF+
Sbjct: 953 KIIEDVARSLRVGAHELHTSASIGISLYPDDGETVPTVMQNADTAMYHAKAIGRNNFQFF 1012
Query: 1244 TNKLNEMATRHMQLETGLKQAISHNELSLVYQPKFCLRNGSLTGLEALLRWQHSELGPIS 1303
+ +N AT ++LE L+QA+ ++EL L +QP+F L +TG+EALLRW+H E G I
Sbjct: 1013 ASAMNRAATERLELERKLRQAMVNDELELHFQPQFALAADRVTGVEALLRWRHPEDGLIP 1072
Query: 1304 PAEFIPLAEETGMINQIGHWVINQSCQQLAEWNELGFSDISMAVNLSARQLK-ADIISTI 1362
P FIP+AEETG+I IG WV+ +C+QL W + G + MAVNLS RQLK + S +
Sbjct: 1073 PDRFIPIAEETGLIVGIGDWVLQAACRQLKAWLDQGLPPLRMAVNLSTRQLKEKEFPSRV 1132
Query: 1363 EVALAVSGLPAKALELELTESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYSSLSYLK 1422
L +GLPA LELE+TES +M P+E++ L L +G+T+A+DDFGTGYSSLSYLK
Sbjct: 1133 AAILQETGLPAVLLELEITESGVMERPEEAITTLQALNDMGVTLAIDDFGTGYSSLSYLK 1192
Query: 1423 RFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNFLALQGC 1482
FPID LKIDR FVRDI DPDDAAI IALAHSL L VVAEGVET QL+ LA GC
Sbjct: 1193 LFPIDRLKIDRSFVRDIERDPDDAAIARGTIALAHSLGLEVVAEGVETSAQLDMLAADGC 1252
Query: 1483 DQVQGFLLSKPLSAQDCQTLLQQR 1506
D+VQG+ S+PL L Q+
Sbjct: 1253 DEVQGYFFSRPLPLAAATAFLAQQ 1276
Score = 68.2 bits (165), Expect = 5e-15
Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 20/290 (6%)
Query: 806 FTLVSMGWALRWRKQKRSQQQEFETSIRASEERLKLALWASGDGMWDWNIQE------QQ 859
FTL + ++ ++ ++Q ++ +++RL A G W+ +++ ++
Sbjct: 312 FTLYLLRQQRKFFAERHEREQLAAEELQRTQDRLLEAQRIGHIGSWERDLRSGRLWCSEE 371
Query: 860 VYR-TNTDIAVPQWNGHQLLHDNAHPEDRERFKYELTEHLQGRSPFFEVEYRIEHSPGKW 918
YR D + P H L + HPEDR++ + + T+H + F VEYR+ G+
Sbjct: 372 AYRLVGLDPSEPLTYAHFL--ELVHPEDRDKVQ-QATDHNAAKEETFAVEYRVLLQDGRL 428
Query: 919 VWILERGKVVETNAQERPIRMTGTTRNITSRKLIENELVLSS----QVLNSMNEAVVVAG 974
+ RG++ +A+ +P+R +GTT++IT RKL E E S VL +M + + V
Sbjct: 429 RHFINRGRLF-WDARGQPLRASGTTQDITERKLAEEEYRRQSTQLRAVLQNMPQGISVFD 487
Query: 975 LDYRIRSVNPAFSAITGYSEGQI--SDKFLIHLAYSRQQRDLFNSIEQQLLRHKHWAGEI 1032
R++ N + G + F + Y Q+ + +Q ++ +
Sbjct: 488 EHLRLQLWNEGMREVLGLPAEALYRGVPFEDLVRYPAQRGEYGPGDPEQHVQERKALAMQ 547
Query: 1033 WIRNKARRAIL---VWLEINQVIDVKGETSHFVAVFTDITERKKAEEDLR 1079
+ ++ R L L + + G+ + F+ +TDI+E K+ E+ LR
Sbjct: 548 FKPHRFERTRLDGRTTLVQGEPLFDDGQLTGFITTYTDISESKRNEQALR 597
Score = 27.7 bits (60), Expect = 0.008
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 1046 LEINQVIDVKGETSHFVAVFTDITERKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAIS 1105
LEI QV G T + ++TDIT R +AE +L+ P + D+ N IS
Sbjct: 695 LEIRQVNLGDGST---IIIYTDITARHRAEAELKLAEK--VFANSPEAIMICDQGNRIIS 749