Pairwise Alignments

Query, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1126 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  479 bits (1232), Expect = e-139
 Identities = 260/567 (45%), Positives = 361/567 (63%), Gaps = 1/567 (0%)

Query: 941  GTTRNITSRKLIENELVLSSQVLNSMNEAVVVAGLDYRIRSVNPAFSAITGYSEGQISDK 1000
            G + +IT  K    +L L+  V+ +  + V++      I SVN AF+ ITGY+  +   +
Sbjct: 558  GISTDITEIKQTTEQLRLAGVVMENTADGVMITDARGVILSVNKAFTDITGYTAAEALGQ 617

Query: 1001 FLIHLAYSRQQRDLFNSIEQQLLRHKHWAGEIWIRNKARRAILVWLEINQVIDVKGETSH 1060
                L   RQ+ + +  + + L     W GEIW R K       WL IN V+D +G+  +
Sbjct: 618  LPSLLRSDRQEPEFYRLMWETLASTGIWRGEIWNRRKNGALFPEWLTINAVLDQEGKPVN 677

Query: 1061 FVAVFTDITERKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFLD 1120
            +V VF+DI+  K ++++L  LA FD LTGLPNRTLF DRL HA+ +A R    +A+L LD
Sbjct: 678  YVGVFSDISAIKHSQDELERLAHFDPLTGLPNRTLFHDRLQHALERAQRYGQELAVLLLD 737

Query: 1121 LDRFKHINDSMGHHIGDLLLKAVAHRLQSAVREGDTVARLGGDEFTIILEGVAKTKAATL 1180
            LD FK +NDS+GH  GDLLL+  AHR +  VR  DTV+RLGGDEF IIL  +A+   A  
Sbjct: 738  LDGFKTVNDSLGHPTGDLLLQQAAHRFKECVRVEDTVSRLGGDEFAIILNNLAQGTDAIS 797

Query: 1181 ISEKVLKAFQAPFLLDDKSLNISTSIGISLYPNDAKDVDSLIKFADTAMYHAKALGRNNF 1240
            + +K+L+A Q PF LD  +  ++TSIGI++ P D    ++L++ ADTAMY AK  GRN++
Sbjct: 798  VVKKLLQALQEPFDLDGTAALVTTSIGIAIAPLDGDTPEALVRNADTAMYGAKEGGRNSY 857

Query: 1241 QFYTNKLNEMATRHMQLETGLKQAISHNELSLVYQPKFCLRNGSLTGLEALLRWQHSELG 1300
            +FY   +   A   +  E  L++A+   E  + YQPK  L +GSL G EALLRW+    G
Sbjct: 858  RFYQADMTRRAQERLTQERSLRRALEEGEFEVWYQPKLELADGSLCGAEALLRWRDPARG 917

Query: 1301 PISPAEFIPLAEETGMINQIGHWVINQSCQQLAEWNELGFSDISMAVNLSARQL-KADII 1359
             +SPAEFIPLAE TG+I  IG  V++Q C+Q  +W + G     +AVN++A Q+ ++D  
Sbjct: 918  LVSPAEFIPLAERTGLIVPIGELVLDQVCRQARQWADRGLLAGRIAVNVAALQIERSDYA 977

Query: 1360 STIEVALAVSGLPAKALELELTESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYSSLS 1419
            +T+  AL   GLPA ALE+E+TES+IM +P  +  +L  ++ LG+T AVDDFGTGYSSL+
Sbjct: 978  ATLRQALEKHGLPATALEVEVTESLIMESPNHARQVLCDIQTLGVTTAVDDFGTGYSSLA 1037

Query: 1420 YLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNFLAL 1479
            YLK  PI+ LKIDR FV D+ ++ +D AI  AIIAL HSL  ++ AEG+ETQEQL FL  
Sbjct: 1038 YLKVLPINHLKIDRAFVADLPHNANDVAIARAIIALGHSLGFHITAEGIETQEQLEFLRG 1097

Query: 1480 QGCDQVQGFLLSKPLSAQDCQTLLQQR 1506
             GCDQ QG+L  +P+ A D    +QQR
Sbjct: 1098 AGCDQGQGYLFGRPMPAADFTAWMQQR 1124