Pairwise Alignments

Query, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1037 a.a., diguanylate phosphodiesterase from Burkholderia phytofirmans PsJN

 Score =  445 bits (1145), Expect = e-128
 Identities = 272/707 (38%), Positives = 391/707 (55%), Gaps = 21/707 (2%)

Query: 808  LVSMGWALRWRKQKRSQQQEFETSIRASEE-RLKLALWASGDGMWDW---NIQEQQVYRT 863
            +   G A+R       + +E E   RA  +  +   +W   DG   W    ++    Y  
Sbjct: 328  MTGRGRAMRLASAMTKELRENEEKFRAIADCTVNWEIWWGTDGKPRWINSAVEAYIGYTV 387

Query: 864  NTDIAVPQWNGHQLLHDNAHPEDRERFKYELTEHLQGRSPFFEVEYRIEHSPGKWVWILE 923
            +  +A+P + G  +     +P D  R   E  + LQG     ++E+R     G  +W L 
Sbjct: 388  DECMALPDFAGTVI-----YPADIPRVAPEFQKALQGLRGD-DLEFRCVRKDGSLMW-LS 440

Query: 924  RGKVVETNAQERPIRMTGTTRNITSRKLIENELVLSSQVLNSMNEAVVVAGLDYRIRSVN 983
               V  T+++   I    + R+IT RK +E EL +++   +SM E +++      I  VN
Sbjct: 441  ASWVPITDSKGEFIGFRTSGRDITERKQVEAELRIAAVAFDSM-EPMMITDASATILRVN 499

Query: 984  PAFSAITGYSEGQISDKFLIHLAYSRQQRDLFNSIEQQLLRHKHWAGEIWIRNKARRAIL 1043
             AF+  TGY+  +I  +    L   R     F  + +++     W GE+W R K      
Sbjct: 500  SAFTECTGYTAEEIVGQTPRVLRSGRHDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYP 559

Query: 1044 VWLEINQVIDVKGETSHFVAVFTDITERKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHA 1103
             WL I+ V+   G  SH+V    DITERK AEE ++ LA FD LT LPNRTL  DRL  A
Sbjct: 560  KWLTISAVMSDNGTVSHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQA 619

Query: 1104 ISQAHRSNNIVALLFLDLDRFKHINDSMGHHIGDLLLKAVAHRLQSAVREGDTVARLGGD 1163
            I+ + R+    ALLF+DLD FK +ND++GH  GDLLL+ VA RL  +V E DTVAR+GGD
Sbjct: 620  ITASARNEACGALLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGD 679

Query: 1164 EFTIILEGVAKTK-----AATLISEKVLKAFQAPFLLDDKSLNISTSIGISLYPNDAKDV 1218
            EF ++L  + K +         + E++L    +P+ L       S SIG +++      +
Sbjct: 680  EFVVVLGNLHKNRQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASI 739

Query: 1219 DSLIKFADTAMYHAKALGRNNFQFYTNKLNEMATRHMQLETGLKQAISHNELSLVYQPKF 1278
            D L+K AD AMY +K  GRN  +F+   +  +  +   LE GL+ AI  N+  L YQ + 
Sbjct: 740  DELLKQADLAMYKSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQ- 798

Query: 1279 CLRNGSLTGLEALLRWQHSELGPISPAEFIPLAEETGMINQIGHWVINQSCQQLAEW-NE 1337
             +    +TG EAL+RWQH + G + PAEFIPLAEETG+I  +G WV+  +C QLA W   
Sbjct: 799  -VVGTRVTGAEALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAAR 857

Query: 1338 LGFSDISMAVNLSARQL-KADIISTIEVALAVSGLPAKALELELTESMIMGNPQESVNIL 1396
               + +++AVN+S +Q  KAD +  +   +  +G     L+LELTES+++ N Q+ +  +
Sbjct: 858  PDMAHLTIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKM 917

Query: 1397 SKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALA 1456
            S LKA G+  A+DDFG GYSSLSYLKR P+D LKIDR FVRD+  D +DA I   I+ALA
Sbjct: 918  SALKAKGIVFALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALA 977

Query: 1457 HSLELNVVAEGVETQEQLNFLALQGCDQVQGFLLSKPLSAQDCQTLL 1503
             SL L V+AEGVET+ Q +FLA  GC   QG+   +PL  +D + LL
Sbjct: 978  RSLGLGVIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFEALL 1024