Pairwise Alignments

Query, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1059 a.a., diguanylate phosphodiesterase from Burkholderia phytofirmans PsJN

 Score =  462 bits (1189), Expect = e-134
 Identities = 263/659 (39%), Positives = 387/659 (58%), Gaps = 28/659 (4%)

Query: 860  VYRTNTDIAVPQWNGHQLLHDNA------------------HPEDRERFKYELTEHLQGR 901
            V  T   + V    GH++LH N                     E R RF  +L++  +  
Sbjct: 398  VEATPVPMVVTAIPGHEVLHANRPALAWLNGCTVDPWGYGLDSEVRARFFQQLSD--RDA 455

Query: 902  SPFFEVEYRIEHSPGKWVWILERGKVVETNAQERPIRMTGTTRNITSRKLIENELVLSSQ 961
               FEV ++  + P  W  +  R        Q R   +T  T  I   K +E  L L  +
Sbjct: 456  VDEFEVRWKASNEPS-WAMLSARRLAF----QGRDAVLTAFTP-INQIKSMEQRLELWGK 509

Query: 962  VLNSMNEAVVVAGLDYRIRSVNPAFSAITGYSEGQISDKFLIHLAYSRQQRDLFNSIEQQ 1021
            V  + +EA+++     R+ + N +F   TGY    ++ K    L+ +  Q DL  ++   
Sbjct: 510  VFEASSEAILILDAQRRLVTANASFYRATGYRADDVAGKEPAFLSGAHVQGDLLAAVIDS 569

Query: 1022 LLRHKHWAGEIWIRNKARRAILVWLEINQVIDVKGETSHFVAVFTDITERKKAEEDLRFL 1081
            + R   W GE  +R +A      WL I+ V D +   SH++    DIT+RKK+E  ++FL
Sbjct: 570  VDRQSAWHGEANVRRRAGSDYPAWLMISAVRDRRASLSHYICTLIDITDRKKSEARIQFL 629

Query: 1082 ASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFLDLDRFKHINDSMGHHIGDLLLK 1141
            A  D LT LPNR LF  RL   +  A  +++ VA+LF+DLDRFKH+NDS+GHHIGD LL+
Sbjct: 630  AEHDLLTELPNRALFMKRLRAVLDHARVADHRVAVLFIDLDRFKHVNDSLGHHIGDSLLR 689

Query: 1142 AVAHRLQSAVREGDTVARLGGDEFTIILEGVA-KTKAATLISEKVLKAFQAPFLLDDKSL 1200
            +V+ RL  AVR  DTV+RL GDEFTIIL GV+   +    I +++L   + P  LD  +L
Sbjct: 690  SVSRRLVRAVRADDTVSRLSGDEFTIILNGVSGAAEVGRTIEDRLLPLMRQPHELDGMAL 749

Query: 1201 NISTSIGISLYPNDAKDVDSLIKFADTAMYHAKALGRNNFQFYTNKLNEMATRHMQLETG 1260
             +S S+G++L+P+D +D+++L++ AD AMY AK  GRN  +F+T  + E A    QLE  
Sbjct: 750  PVSCSVGVALFPDDGEDIETLMQNADAAMYQAKGAGRNLVKFFTPDMAERALHRAQLEAS 809

Query: 1261 LKQAISHNELSLVYQPKFCLRNGSLTGLEALLRWQHSELGPISPAEFIPLAEETGMINQI 1320
            L+ AI+ +E  L YQP    R G L  +E LLRW +  LG +SPAEFIP+AEE+ +I  +
Sbjct: 810  LRNAIAMDEFRLEYQPCIDARTGELVAVEGLLRWHNPRLGKVSPAEFIPIAEESRLIISM 869

Query: 1321 GHWVINQSCQQLAEWNELGFSDISMAVNLSARQLK-ADIISTIEVALAVSGLPAKALELE 1379
            G WVI Q+C+Q+AEWN+ G + + +++N+SA QL+  ++I  +  +L  + +  + LELE
Sbjct: 870  GAWVIEQACRQIAEWNDEGLAPLRVSINVSAIQLRDPNLIGMLATSLERNRVAPERLELE 929

Query: 1380 LTESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDREFVRDI 1439
            +TE+++M + +   + ++ ++ LG+ +++DDFG GYSSLSYL RFP+D LKIDR FV+D+
Sbjct: 930  ITETVLMDSAEHYESTVAGIRKLGIKLSLDDFGVGYSSLSYLNRFPLDRLKIDRAFVKDM 989

Query: 1440 TNDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNFLALQGCDQVQGFLLSKPLSAQD 1498
             + P D AI  AII L H L L VVAEGVE++ Q   L   GCD++QGFL S  LS  D
Sbjct: 990  LDAPADLAIIRAIIELGHELGLRVVAEGVESEHQAQILRNIGCDELQGFLFSPSLSPAD 1048