Pairwise Alignments

Query, 484 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 487 a.a., Protein of unknown function UPF0061 from Pseudomonas syringae pv. syringae B728a

 Score =  438 bits (1127), Expect = e-127
 Identities = 237/477 (49%), Positives = 306/477 (64%), Gaps = 15/477 (3%)

Query: 14  FYSQVYPQGISNPHWLAWSDDAAALIGLHQPTDEL---LQGLSGNAAVEGASYYAQVYSG 70
           F + V P+ I  P  +  S  A AL+ L     +L    +  SG+     A   A VYSG
Sbjct: 20  FSTSVLPEPIDAPQLVVASQSALALLDLAPEQADLPLFAEIFSGHKLWSEAEPRAMVYSG 79

Query: 71  HQFGGYTPRLGDGRSIILGEAIGPNGA-WDVALKGGGPTPYSRHGDGRAVMRSAVREFLV 129
           HQFG Y PRLGDGR ++LGE     G  WD+ LKG G TPYSR GDGRAV+RS++REFL 
Sbjct: 80  HQFGSYNPRLGDGRGLLLGEVYNDAGEHWDLHLKGAGRTPYSRMGDGRAVLRSSIREFLA 139

Query: 130 SEALHHLGVPTTRALAVIGSDMPVWRESQETAAITVRLARSHIRFGHFEFFSHSERGQAD 189
           SE LH LG+P++RA  V+ S  PVWRE+QE AA+ +RLA+SH+RFG  E+F +++  Q +
Sbjct: 140 SEVLHALGIPSSRAGCVVSSSTPVWRETQEHAAMVLRLAQSHVRFGSLEYFFYTK--QPE 197

Query: 190 KLTQLLNFTLKQHYPHLSCDPAGYKAWFLQVVQDSAKMIAHWQAIGFAHGVMNTDNMSIL 249
           +L  L    L  HYPH    P  Y A F ++V+ +A++IA WQA GF HGVMNTDNMSIL
Sbjct: 198 QLKTLAEHVLTMHYPHCQEQPEPYLAMFREIVERNAELIAKWQAYGFCHGVMNTDNMSIL 257

Query: 250 GDSFDFGPFAFLDTFQEDFICNHSDPDGRYAFGQQPGIGLWNLQRLAQALTPVIASDDLI 309
           G +FDFGPFAFLD F E FICNHSD +GRY+F  Q  I  WNL  LAQALTP I+ D L 
Sbjct: 258 GITFDFGPFAFLDDFDEHFICNHSDHEGRYSFSNQVPIAQWNLSALAQALTPFISVDALR 317

Query: 310 AALNQYQHALVQHYLALMRAKLGLVQQADSSAEQDQQDLELIGRFTVLMEKNQLDYSHTW 369
            A+  +      HYL LMR +LGL      + EQD+Q   L+ +   LM+ + +DY+  +
Sbjct: 318 EAIGLFLPLYQAHYLDLMRRRLGLT----VAHEQDEQ---LVSQLLKLMQNSGVDYTLFF 370

Query: 370 RRFGQLDPSSLHSSLRDDFIDLNEFDAWYQVYQARLGKVTD--VEAWQQQCNRVNPKYIL 427
           RR G    +    +LRDDF+D+  FD W Q YQAR+    +   +  Q + + VNP YIL
Sbjct: 371 RRLGDQPAAEALRTLRDDFVDIKGFDGWAQAYQARIALENNGTEQERQTRMHAVNPLYIL 430

Query: 428 RNYLAQEAIIAVDEGNLAQLQRLHQVLRQPFTEQIEHEELAKRPPDWGQGLIMSCSS 484
           RNYLAQ AI A ++G+ A+++RLHQVL  PFTEQ   +  A+RPPDWG+ L +SCSS
Sbjct: 431 RNYLAQNAIAAAEKGDYAEVRRLHQVLCTPFTEQPGMQGYAQRPPDWGKHLEISCSS 487