Pairwise Alignments

Query, 484 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 481 a.a., protein of unknown function UPF0061 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  280 bits (715), Expect = 1e-79
 Identities = 182/471 (38%), Positives = 257/471 (54%), Gaps = 34/471 (7%)

Query: 8   FTQLPE-FYSQVYPQGISNPHWLAWSDDAAALIGLHQPTDELLQG---LSGNAAVEGASY 63
           +  LP+ F++Q+ P  +S P  +  +   A  +GL     E  +G   L+GNA  EGA  
Sbjct: 11  YAALPDRFHAQLAPTPVSAPGLIKVNHRLARELGLDPAALESPEGVAMLAGNAVPEGAVP 70

Query: 64  YAQVYSGHQFGGYTPRLGDGRSIILGEAIGPNGAW-DVALKGGGPTPYSRHGDGRAVMRS 122
            AQ Y+GHQFGG+ P+LGDGR+I+LGE    +GA  DV LKG GPTP+SR GDGRA +  
Sbjct: 71  IAQAYAGHQFGGWNPQLGDGRAILLGELRHADGALRDVQLKGSGPTPFSRMGDGRAGLGP 130

Query: 123 AVREFLVSEALHHLGVPTTRALAVIGSDMPVWRESQETAAITVRLARSHIRFGHFEFFSH 182
            +RE+++SEA+H LGVPTTRALA + +   V RE     A+  R+A SH+R G F+FF+ 
Sbjct: 131 VLREYILSEAMHALGVPTTRALAAVTTGERVLREQVLPGAVFTRVASSHLRVGTFQFFA- 189

Query: 183 SERGQADKLTQLLNFTLKQHYPHLSCDPAGYKAWFLQ--VVQDSAKMIAHWQAIGFAHGV 240
             R   D L  L +F   +H      DP    A  L   V+   A +IA W  +GF HGV
Sbjct: 190 -ARDDLDALETLCDFARARH------DPEAETALDLLRGVIARQADLIARWMGLGFIHGV 242

Query: 241 MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPDGRYAFGQQPGIGLWNLQRLAQALT 300
           MNTDNM+I G++ D+GP AF++ +  D + +  D  GRYA+  QP I +WNL +LA AL 
Sbjct: 243 MNTDNMTISGETIDYGPCAFMEAYHPDTVYSSIDRHGRYAYRNQPEIAVWNLAQLATALL 302

Query: 301 PVIASDD--LIAALNQYQHALVQHY----LALMRAKLGLVQQADSSAEQDQQDLELIGRF 354
           P+I +D    I    +  H     Y    L + RAKLGL       A   ++D +L    
Sbjct: 303 PLIDADQDRAIEVATEAVHGFADLYQSAWLDVFRAKLGL-------ATAREEDAKLAHGL 355

Query: 355 TVLMEKNQLDYSHTWRRFGQLDPSSLHSSLRDDFIDLNEFDAWYQVYQARLGKV-TDVEA 413
             LM +  +D++  +R   +    +     R  +     FDAW + ++ARL +   D E 
Sbjct: 356 LRLMAEAGVDFTLAFRGLAEGQEVA-----RKLYAQPEIFDAWARDWRARLAEEGVDAET 410

Query: 414 WQQQCNRVNPKYILRNYLAQEAIIAVDEGNLAQLQRLHQVLRQPFTEQIEH 464
              +    NP +I RN+  ++AI A   G+ A    L  VL +PF +Q EH
Sbjct: 411 LTARLTSANPAFIPRNHRVEQAIQAGMAGDFAPFHTLVAVLERPFDDQPEH 461