Pairwise Alignments

Query, 310 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 315 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  250 bits (639), Expect = 3e-71
 Identities = 139/286 (48%), Positives = 182/286 (63%), Gaps = 11/286 (3%)

Query: 10  QAYWWLSLFGGLHCLALAIYIRYFYHS-GSNQKLLAGFLSLVAFYFLTGMLNHENTPIPI 68
           + YWWLSL GGLHC+ L +Y+RY Y     N KLL    SL+A YFLTG+LN +N+P+P+
Sbjct: 34  EGYWWLSLLGGLHCIGLGLYLRYLYRDRNDNHKLLGAIFSLLALYFLTGLLNRDNSPLPL 93

Query: 69  HVLFNLITPIYFLLMPLLYLYCKRSLEQRTEPIGFSWHYWPAIITLLLAVLDIILRLNLH 128
             LF L+ P YFLLMP+LYLYC RSL      IG S H+ PAI  +L+  L  +L   + 
Sbjct: 94  QQLFILLIPAYFLLMPMLYLYCYRSLHDIKGSIGLSRHFIPAIALVLVIGLSALLSGEMR 153

Query: 129 KNAVEFQTEFFNYRQDIDLSHWSLVLPLLLFIQTAAYFAALWRLLKQYKLHQQLISDTPQ 188
           +     +   FN+     ++    VLPLLL +QT  YF A+WRLL+++K          Q
Sbjct: 154 QLVSTSRVTQFNH-----VTLLGTVLPLLLVLQTGLYFYAIWRLLRRFKGRAHRAH---Q 205

Query: 189 DALRVIRFRWLFGLTLAMLFNWLLRVFLVVLPFYLGDTVLPLSQALPRLSLLLSFYLLAA 248
           D+L+ I+FRWL  LTLAML NWL+R+ LV+LP+ LGD V   +QA  RL LLLS YLLA 
Sbjct: 206 DSLKDIKFRWLLALTLAMLTNWLVRMGLVILPYLLGDKVSLAAQASTRLFLLLSLYLLAL 265

Query: 249 YGLKQITRTAYLKGHLSAP-QPKAEIQSS-VILTPEEFEFIQKVQQ 292
           YGLKQIT +AYL+G LS   Q +A   SS  +L  EE  ++Q++ Q
Sbjct: 266 YGLKQITMSAYLRGRLSPDLQTQARPSSSRQLLNAEELNYLQQLLQ 311