Pairwise Alignments

Query, 439 a.a., putrescine-ornithine antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 468 a.a., arginine:ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (280), Expect = 2e-29
 Identities = 101/445 (22%), Positives = 194/445 (43%), Gaps = 42/445 (9%)

Query: 5   ENKIGVVQLTIITIVNMMGSGIIMLPTQLAQVGT--ISVLSWLVTAAGSTALAFAFAKCG 62
           + K+G+  LT + I +M+G+G+  LP  +A V +    ++ W +T  G   LA +F    
Sbjct: 2   DKKLGLGSLTALVIGSMIGAGVFSLPQNMAAVASPLAVMIGWSITGIGMIFLALSFQYLA 61

Query: 63  MFSKK-SGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYAAVLLEVNLSPM 121
           +     + G+ G+A   FG    F + + Y  S ++ANV+  +       +L +   +P 
Sbjct: 62  VNKPHVNSGVFGFAREGFGDFAGFCSAWGYWFSAMVANVSYLVIVFSTLGLLFD---TPD 118

Query: 122 AICLAT------IG----VLWLATVANFGGARITGRVSSVTVWGIILPVI-----GVSLI 166
            I   +      IG    +LW        G +    ++ +T    ++P++      ++  
Sbjct: 119 QIIFGSGNTWWSIGGASLLLWAVHSLVLRGVQTAALINLITTMTKMVPLLLFIVSAIAAF 178

Query: 167 GWFWFDIDLYKGAWNPHDMPFFKALGGSIAMTLWAFLGLESACANSEAVDNPEKNVPIAV 226
            W  F +D + G  +         +  ++ +T+W F+G+E A   S       K++  A 
Sbjct: 179 NWSTFSLD-FAGLHHISGADLLGQVKATMLITVWVFVGIEGAVVVSSRA-RQRKDIGRAT 236

Query: 227 MGGTLGAALIYIVSTNVIAGIVPNAELASSNAPFGLAFAQMFNPVVGK----IVMACAII 282
           + G L A  IY++ T +  G++   +LA    P   + AQ+   ++G     I+    +I
Sbjct: 237 ILGLLTALSIYVLVTLLSMGVIQVNQLAQYPNP---SMAQVLTTIIGPWGKYIIAVGLLI 293

Query: 283 SCTGSLLGWQFTIAQVFKASADEGFFPKVFAKVSKADAPIWGM---TIIVSIQTLLSLMT 339
           S  G+ L W    ++    +A +  FP+ FAK ++A +P+  +   T+ + +  +L   T
Sbjct: 294 SVCGAFLSWTVLASEAPFLAAKDKMFPRHFAKQNQAGSPVNALFLTTLCIQVSLILVRYT 353

Query: 340 ISPSLSKQFEALVNLAVVTNIVPYILSMAALGVMQKQLKVPANKARVANVIAVIGALYSF 399
                S  +++L+  A    +VPY L    +G    +L +         +I      Y  
Sbjct: 354 -----SSTYDSLLIFASEMILVPYFL----VGAFTLKLALEQRDRGKLLLIGFGATAYGL 404

Query: 400 YALYSSGETAVMLGAIATFFGWTIY 424
           + LY+SG   +ML  +    G+  Y
Sbjct: 405 WLLYASGLHYLMLSTLLYVPGFAFY 429