Pairwise Alignments

Query, 439 a.a., putrescine-ornithine antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 434 a.a., amino acid permease from Dyella japonica UNC79MFTsu3.2

 Score =  202 bits (513), Expect = 2e-56
 Identities = 129/429 (30%), Positives = 201/429 (46%), Gaps = 16/429 (3%)

Query: 1   MSKSENKIGVVQLTIITIVNMMGSGIIMLPTQLAQVGTISVLSWLVTAAGSTALAFAFAK 60
           M+     +G   LT + + NM+GSG+ +LP  LA  G  S+L W  T  G+  LA   A 
Sbjct: 1   MTSPARLLGPWMLTALVVGNMIGSGVFVLPAALAPYGAASLLGWAFTMGGALLLALVHAW 60

Query: 61  CGMFSKKSGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVG-YAAVLLEVNLS 119
                   GG   YA  AFG +  F+A ++Y   +  AN AIA++  G   A+    N +
Sbjct: 61  LAQLVANHGGAYAYARQAFGDTAGFVAAWSYWTCVWTANAAIAVAFAGSLGAIWPAANAT 120

Query: 120 PMAICLATIGVLWLATVANFGGARITGRVSSVTVWGIILPVIGVSLIGWFWFDIDLYKGA 179
           P     A + VLWL T  N  G R  GR+  VT    ++P++   + G     + L  GA
Sbjct: 121 PWRGTAAALAVLWLCTAINAAGVREAGRMQLVTTALKVIPLLVFGVCG-----LALVHGA 175

Query: 180 ----WNPHDMPFFKALGGSIAMTLWAFLGLESACANSEAVDNPEKNVPIAVMGGTLGAAL 235
               +NP           + A+TLWAFLGLE+A   +  V +P++ VP A + G L A +
Sbjct: 176 AYQPFNPSGQSLPSVTTATAALTLWAFLGLEAATVPTGVVRDPQRTVPRATVAGMLVAGV 235

Query: 236 IYIVSTNVIAGIVPNAELASSNAPFGLAFAQMFNPVVGKIVMACAIISCTGSLLGWQFTI 295
             +++   + G++P+     S AP   A AQ + P  G  +   A +SC G+L GW    
Sbjct: 236 ATMLACTAVIGLLPHGAAQGSAAPMAAAAAQTWGPAAGWAMGLVATVSCLGALNGWVLLQ 295

Query: 296 AQVFKASADEGFFPKVFAKVSKADAPIWGMTIIVSIQTLLSLMTISPSLSKQFEALVNLA 355
            Q   A+A +G FP  FA+      P +G+ +   + ++L     S SL   F   + L+
Sbjct: 296 GQTPYAAAQDGLFPAPFARTDARGTPWFGLLLSSVLASVLIAANGSKSLVALFTLSILLS 355

Query: 356 VVTNIVPYILSMAALGVMQKQLKVPANKARVANVIAVIGALYSFYALYSSGETAVMLGAI 415
               ++PY+LS+ A   + +   V    A      A +   YS +AL  +G  A++ G +
Sbjct: 356 TAATLLPYVLSVLAWWRIDRGAGVARRTA------AALALAYSLWALIGTGAEALLWGGV 409

Query: 416 ATFFGWTIY 424
               G  ++
Sbjct: 410 LLLLGLPVF 418