Pairwise Alignments

Query, 786 a.a., hypothetical Fe-S oxidoreductase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 806 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 1325 bits (3429), Expect = 0.0
 Identities = 649/805 (80%), Positives = 707/805 (87%), Gaps = 30/805 (3%)

Query: 1   MQVESTLFSHPKYWAECFGTAPFLPMSRKEMEKLGWDSCDIIIVTGDAYVDHPSFGMAVI 60
           M+VE+TLFS+P++WAEC+GTAPFLPMSR EM++LGWDSCDIIIVTGDAYVDHPSFGMAVI
Sbjct: 1   MRVEATLFSYPRFWAECYGTAPFLPMSRAEMDQLGWDSCDIIIVTGDAYVDHPSFGMAVI 60

Query: 61  GRMLEAQGYRVGIIAQPDWSSKDAFMQLGRPNLFFGVTAGNMDSMINRYTADRRIRSDDA 120
           GRMLEAQG+RVGII+QPDWSSKD FM+LG+PNLF+GVTAGNMDSMINRYTADR++R DDA
Sbjct: 61  GRMLEAQGFRVGIISQPDWSSKDDFMKLGKPNLFYGVTAGNMDSMINRYTADRKLRHDDA 120

Query: 121 YTPGDVGGKRPDRAVTVYTQRCKEAFKDVPVIIGGIEASLRRIAHYDYWSDKVRRSVIFD 180
           YTPG+VGGKRPDRAVTVYTQRCKEAFKDVPV+IGGIEASLRRIAHYDYWSDKVRRSVIFD
Sbjct: 121 YTPGNVGGKRPDRAVTVYTQRCKEAFKDVPVVIGGIEASLRRIAHYDYWSDKVRRSVIFD 180

Query: 181 AKADILMYGNAERPLAEVARRLAAGEAIADIQDVRGTAVIRKEPMPEWRGMDSRKIDQLH 240
           AKADIL+YGNAERPLAE+A RLA GEA + + D+RGTA+I K PMP WRGMDSRKIDQLH
Sbjct: 181 AKADILVYGNAERPLAEIAHRLAGGEAASQLTDIRGTAIISKTPMPGWRGMDSRKIDQLH 240

Query: 241 KIDPIPNPYGADDVGCANLSGPSDAKIF-DNDAP------KPISVQPPRPKPWDKTYVLL 293
           KIDPIPNPYGADDVGC NLSGP+DAK+F D  AP      KPIS+QPP+P+PW++TYVLL
Sbjct: 241 KIDPIPNPYGADDVGCQNLSGPTDAKVFNDETAPDGVNVAKPISIQPPKPRPWEQTYVLL 300

Query: 294 PAFEKVSEDKYLYAHASRILHQEQNPGCARALFQPHGDRGVWVNPPAWPLNTDEMDAVFD 353
           PAFE+VSED+YLYAHASRILHQEQNPGCARALFQPHGDRG+WVNPPAWPL+T+EMDAVFD
Sbjct: 301 PAFERVSEDRYLYAHASRILHQEQNPGCARALFQPHGDRGIWVNPPAWPLSTEEMDAVFD 360

Query: 354 LPYKRVPHPAYGKEKIPAYDMIKTSINIMRGCFGGCSFCSITEHEGRIIQSRSQESIIKE 413
           LPY+RVPHP YGKEKIPAYDMIKTSINIMRGCFGGCSFCSITEHEGRIIQSRS+ESI+KE
Sbjct: 361 LPYQRVPHPVYGKEKIPAYDMIKTSINIMRGCFGGCSFCSITEHEGRIIQSRSKESIVKE 420

Query: 414 IKDIQDKVPGFTGVISDLGGPTANMYRLGCTSEKAEKTCRRLSCVYPSICGHLGTDHKHT 473
           IKDIQ KVPGFTGVISDLGGPTANMYRLGC SEKAEKTCRRLSCV+PSICGHL TDH+HT
Sbjct: 421 IKDIQAKVPGFTGVISDLGGPTANMYRLGCKSEKAEKTCRRLSCVFPSICGHLDTDHQHT 480

Query: 474 IDLYRAARAVPGIKKILIASGVRYDLAIEDPAYVKELVQHHVGGYLKIAPEHTEEGPLSK 533
           IDLYRAAR VPGIKK+LIASGVRYDLAIEDP YVKEL +HHVGGYLKIAPEHTEEGPLSK
Sbjct: 481 IDLYRAARDVPGIKKVLIASGVRYDLAIEDPRYVKELAKHHVGGYLKIAPEHTEEGPLSK 540

Query: 534 MMKPGMGAYDKFKELFDKFSKEAGKEQFLIPYFISAHPGTTDEDMLNLALWLKERKFKLD 593
           MMKPGMG YDKFKELFDK+SKEAGKEQ+LIPYFISAHPGTTDEDM+NLALWLKERKFKLD
Sbjct: 541 MMKPGMGTYDKFKELFDKYSKEAGKEQYLIPYFISAHPGTTDEDMVNLALWLKERKFKLD 600

Query: 594 QVQNFYPSPMANATTIYHTELNSLKNVKHTSEVVPVPKKGRQRRLHKALLRYHDPAGWPI 653
           QVQNFYPSPMANATTIYHTELNSLKNVKH+SE VPVPKKGRQRRLHKALLRYHD AGWP+
Sbjct: 601 QVQNFYPSPMANATTIYHTELNSLKNVKHSSEEVPVPKKGRQRRLHKALLRYHDSAGWPL 660

Query: 654 IREGLIAMGREDLIGNSPNHLVPPEGRNER-------GPKWMKDANQGQKALTRFSGNQF 706
           IRE LIAMG+E LIG    HLVPPEGR E+       G      A +GQ+A TRFSGNQF
Sbjct: 661 IREALIAMGKEHLIGTGTQHLVPPEGRAEQWAGKGNSGKGGKPKAEKGQQAFTRFSGNQF 720

Query: 707 DERKGKGDAKGKPSA-SKPKGPKSG-ANAPQSQQPKT-----------SRPGAKAPFGQS 753
           D+R  KG  KGKP   ++ KG   G ANA  S   KT           +RPGAK  FG+ 
Sbjct: 721 DDR--KGGEKGKPQGKTQAKGKTQGAANANGSTPGKTQGKSQGKGGNNARPGAKPVFGKP 778

Query: 754 GFKGKAEQGKAGQNKAGHQGRAGKA 778
              GK+  GK+G  K      A KA
Sbjct: 779 N-AGKSSAGKSGGGKPSGGSSAPKA 802