Pairwise Alignments

Query, 786 a.a., hypothetical Fe-S oxidoreductase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 772 a.a., uncharacterized radical SAM protein YgiQ from Dechlorosoma suillum PS

 Score =  939 bits (2426), Expect = 0.0
 Identities = 472/783 (60%), Positives = 571/783 (72%), Gaps = 36/783 (4%)

Query: 1   MQVESTLFSHPKYWAECFGTAPFLPMSRKEMEKLGWDSCDIIIVTGDAYVDHPSFGMAVI 60
           M+    L S+ KYWA+ FG+APFLPMSR+EM+KLGWDSCD+I+VTGDAY+DHPSFGMA++
Sbjct: 1   MESPKPLTSYRKYWAQRFGSAPFLPMSREEMDKLGWDSCDVILVTGDAYIDHPSFGMALV 60

Query: 61  GRMLEAQGYRVGIIAQPDWSSKDAFMQLGRPNLFFGVTAGNMDSMINRYTADRRIRSDDA 120
           GR+LEAQG+RVGII+QPDW S   F +LG+PNLFFG+TAGNMDSM+NRYT+DR+IRSDDA
Sbjct: 61  GRLLEAQGFRVGIISQPDWHSAQDFKRLGKPNLFFGITAGNMDSMVNRYTSDRKIRSDDA 120

Query: 121 YTPGDVGGKRPDRAVTVYTQRCKEAFKDVPVIIGGIEASLRRIAHYDYWSDKVRRSVIFD 180
           YTP     KRPDRAVTVY QR KEA+   PV++G IEASLRRIAHYDYWSDKVRRSV+ D
Sbjct: 121 YTPNAEPNKRPDRAVTVYAQRAKEAYPGTPVVLGSIEASLRRIAHYDYWSDKVRRSVLPD 180

Query: 181 AKADILMYGNAERPLAEVARRLAAGEAIADIQDVRGTAVIRKE---PMPEWRGMDSRKID 237
           +KAD+L++GNAER L E+  RLA GE I DI+D+RGTA +  +   P  +W  +DS  +D
Sbjct: 181 SKADLLIFGNAERALVELTHRLARGEKIGDIRDLRGTAFMVPKGWLPGEDWGAVDSTSVD 240

Query: 238 QLHKIDPIPNPYGADDVGCANLSGPSDAKIFDNDAPK----------PISVQPP------ 281
              K+D  P+PY   D      SGP  A  F   A            P+   P       
Sbjct: 241 IPGKVDAHPDPYSMGD------SGPRSAPPFAAQAQAAEQGGEVAVLPLKFVPAAERVAA 294

Query: 282 RPKPWDKTYVLLPAFEKVSEDKYLYAHASRILHQEQNPGCARALFQPHGDRGVWVNPPAW 341
           R +   KT V LP++E+V ED  LYAHASR  H E NPG ARAL Q HG+R VW+NPP  
Sbjct: 295 RKEQRAKTVVRLPSYEQVVEDPVLYAHASRTFHLESNPGNARALVQAHGERDVWLNPPPI 354

Query: 342 PLNTDEMDAVFDLPYKRVPHPAYGKEKIPAYDMIKTSINIMRGCFGGCSFCSITEHEGRI 401
           PL T EMD V+ LPY R PHP+YG+ KIPA++MI+ SINIMRGCFGGC+FCSITEHEGRI
Sbjct: 355 PLTTPEMDHVYGLPYARAPHPSYGEAKIPAWEMIRFSINIMRGCFGGCTFCSITEHEGRI 414

Query: 402 IQSRSQESIIKEIKDIQDKVPGFTGVISDLGGPTANMYRLGCTSEKAEKTCRRLSCVYPS 461
           IQSRS++SI+ EI++I+DK PGFTG ISDLGGPTANMYRL C  +K E +CRRLSCV+P 
Sbjct: 415 IQSRSEDSILHEIEEIRDKTPGFTGTISDLGGPTANMYRLACKDKKIESSCRRLSCVFPG 474

Query: 462 ICGHLGTDHKHTIDLYRAARAVPGIKKILIASGVRYDLAIEDPAYVKELVQHHVGGYLKI 521
           IC +LGTDH H I LYR ARA+PG+K++LI SG+RYDLA++ P YVKELV HHVGGYLKI
Sbjct: 475 ICENLGTDHSHLISLYRKARAIPGVKRVLIGSGLRYDLAVQSPEYVKELVTHHVGGYLKI 534

Query: 522 APEHTEEGPLSKMMKPGMGAYDKFKELFDKFSKEAGKEQFLIPYFISAHPGTTDEDMLNL 581
           APEHTEEGPL+KMMKPG+G Y++FK++F+KFSKEAGKEQ+LIPYFI+AHPGTTDEDMLNL
Sbjct: 535 APEHTEEGPLNKMMKPGIGTYERFKQMFEKFSKEAGKEQYLIPYFIAAHPGTTDEDMLNL 594

Query: 582 ALWLKERKFKLDQVQNFYPSPMANATTIYHTELNSLKNVKHTSEVVPVPKKGRQRRLHKA 641
           ALWLK   F+LDQVQ F P+PMA ATT++H+  N LK V   SEVV   + GRQR+LHKA
Sbjct: 595 ALWLKHNNFRLDQVQTFLPTPMALATTMWHSRRNPLKKVGRGSEVVETARAGRQRKLHKA 654

Query: 642 LLRYHDPAGWPIIREGLIAMGREDLIGNSPNHLVP---PEGRNERGPKWM-KDANQGQK- 696
            LRYHDP  WP++RE L  MGR DLIGN   HL+P   P G   +    + +DA + +  
Sbjct: 655 FLRYHDPENWPLLREALKEMGRSDLIGNGKRHLIPIFQPPGTGMKAEAMVRRDAREARDG 714

Query: 697 ALTRFSGNQFDERKGK-GDAKGKPSASKPKGPKSGANAPQSQQPKTSRPGAKAPFGQSGF 755
           A  R  G       GK G   G+ S+ + +    GA  P+     T RPGAK     SG 
Sbjct: 715 AAGRPQGGNRKPAAGKAGGQAGRGSSCQARRQAEGA-GPRG----TPRPGAKPSAAPSGR 769

Query: 756 KGK 758
           + K
Sbjct: 770 RRK 772