Pairwise Alignments

Query, 406 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 529 a.a., Probable conserved transmembrane protein from Mycobacterium tuberculosis H37Rv

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 29/319 (9%)

Query: 72  VKPGELDLGSLARTDELVDELTSGKRTLTEALDRLEEIANKPNPYGPVLTCFSFGTSAAA 131
           V+    D   LA  D LV  +TSG   + +A + ++E+  +P+PY   L        A  
Sbjct: 112 VRTRSTDYSRLAELDRLVQRITSGGVAVDQAHEAMDELTERPHPYPRWLATAGAAGFALG 171

Query: 132 FAMLMGTGWNDVFWSGLLGLLVYGFVYRAER-SSRMAEVL-------EPFATIVCAIVAC 183
            AML+G  W     + +L  +  G + R  R  +R+   L          AT+V A+ A 
Sbjct: 172 VAMLLGGTW----LTCVLAAVTSGVIDRLGRLLNRIGTPLFFQRVFGAGIATLV-AVAAY 226

Query: 184 AIARIDPNINIPVVILSSIIIFIPGLALTLGLAELAARDLISGTARIMDASMLLFKLYFG 243
            IA  DP      ++ + I++ + G+ L   + +     +++  AR+ DA  L   +  G
Sbjct: 227 LIAGQDPT----ALVATGIVVLLSGMTLVGSMQDAVTGYMLTALARLGDALFLTAGIVVG 282

Query: 244 AVLGMAIGKAMFGEAIYIEPEG----------LPRWAIWSAVPILSMALVFIFKARMQD- 292
            ++ +  G    G  I +  +           LP     S   +  + L     A ++  
Sbjct: 283 ILISLR-GVTNAGIQIELHVDATTTLATPGMPLPILVAVSGAALSGVCLTIASYAPLRSV 341

Query: 293 SPWGVLAGIVAFFSAMLGGHFFGDSVGIFFGALAVGVYSNLYARWMKAPASIALLQGIVI 352
           +  G+ AG+       LG   FG  V  +  A+ VG  + L +   +APA +    GI+ 
Sbjct: 342 ATAGLSAGLAELVLIGLGAAGFGRVVATWTAAIGVGFLATLISIRRQAPALVTATAGIMP 401

Query: 353 LVPGSKTYIGLNALISGET 371
           ++PG   +  + A    +T
Sbjct: 402 MLPGLAVFRAVFAFAVNDT 420