Pairwise Alignments

Query, 227 a.a., phosphoglycolate phosphatase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 220 a.a., Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C from Pseudomonas fluorescens FW300-N2E2

 Score = 92.8 bits (229), Expect = 5e-24
 Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 6/217 (2%)

Query: 6   KAIAFDLDGTLIDSVPDLAVATQAALAELGLATCTEAQVRTWVGNGAEMLMRRAMSHALG 65
           K + FD DGTL +S+  +  A   A   +  A C +  V+  +G G    +R     +L 
Sbjct: 6   KLLIFDWDGTLANSIGRIVEAMHVASDRMAYARCDDLAVKGIIGLGLPEAIR-----SLY 60

Query: 66  ADVEQTALDAAMPIFMHHYQENLEKHSALYADVHQVLQTLFDAGFKLAVVTNKPYRFTLP 125
            +++   L      +  HY     + S L+  V   L+ L   G+ LAV T K  R    
Sbjct: 61  PEIDDNELVVFRQHYADHYIALDAEPSPLFEGVAATLEVLRAEGYHLAVATGKARRGLDR 120

Query: 126 LLEAFKINDFFSLVLGGDSLAKMKPDPLPLEHLLAQWQLDKSELLMVGDSKNDILAAKAA 185
           +L++    D+F +    D  A  KP PL LE +LA   +   + LMVGDS  D+  A+ A
Sbjct: 121 VLKSHGWEDYFDITRAADETAS-KPHPLMLEQILAHCDVRPEQALMVGDSSFDLQMARNA 179

Query: 186 GVASIGLTYGYNYGEDIGLTGPDAVCEQFAEILSWLN 222
           G+ S+ ++YG    E +    P    + F E+ +WL+
Sbjct: 180 GMGSVAVSYGAQTIEALRAFEPRLAIDHFPELHAWLS 216