Pairwise Alignments

Query, 301 a.a., ornithine carbamoyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., ornithine carbamoyltransferase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  207 bits (526), Expect = 3e-58
 Identities = 125/306 (40%), Positives = 170/306 (55%), Gaps = 14/306 (4%)

Query: 1   MKHFLSIKELTQQQLLDLITLAKTIKANPA-------EYRHALDGKSVVMLFEKPSLRTR 53
           M HFL I       L  ++   + +K   A       +    L G  V ++FEKPS RTR
Sbjct: 1   MTHFLDIHTTDPADLRAMLDRGRAMKTARAGRPKGASDDDQPLAGHMVALIFEKPSTRTR 60

Query: 54  VSFDIGINKFGGHCLYLDQQNGALGKRESVADFASNLSCWADAIVARTYSHTTIEQLAEF 113
           VSFD+G+ + GG  + L   +  LG  E++AD A  LS + D I+ RT+  TT+ ++AE 
Sbjct: 61  VSFDLGVRQMGGQTMVLSGADMQLGHGETIADTARVLSRYVDLIMIRTFEETTLLEMAEH 120

Query: 114 GTVPVINALSDLYHPCQALADFLTLAEHFENISDVKLAYVGDGNNVTNSLMYCAAILGAT 173
            +VPVIN L++  HPCQ +AD +T  EH   I+  K+ + GDGNNV  S ++ A   G  
Sbjct: 121 ASVPVINGLTNRTHPCQIMADVMTYEEHRGPIAGKKVVWCGDGNNVCASFLHAAGQFGFD 180

Query: 174 MTVICPAGHFPDGYVVAEVQELASRYGGKIVLTSD-IDAIEGHDAIYTDTWISMGDPTPL 232
           MT   P    P+   VA     A   G  + +  D   A++G D +  DTW+SM D    
Sbjct: 181 MTFTGPPTLDPEAEFVAG----ARAKGVTVEIERDPAVAVQGADLVVADTWVSMHDSQTT 236

Query: 233 AEIK-DKFAPYQVNNALMAKAGAH-FFMHCLPAHRGVEVTDAVMDGECSLILQQAENRMH 290
            E + ++  PYQV+ ALM KA     FMHCLPAHRG EVT  VMDG  S+I  +AENR+H
Sbjct: 237 KERRHNQLRPYQVDRALMEKAKPDALFMHCLPAHRGEEVTSEVMDGPHSVIFDEAENRLH 296

Query: 291 AQNAVL 296
           AQ AV+
Sbjct: 297 AQKAVM 302