Pairwise Alignments

Query, 301 a.a., ornithine carbamoyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., ornithine carbamoyltransferase from Bifidobacterium breve UCC2003

 Score =  226 bits (577), Expect = 4e-64
 Identities = 124/305 (40%), Positives = 185/305 (60%), Gaps = 6/305 (1%)

Query: 1   MKHFLSIKELTQQQLLDLITLAKTIKANPAEYRHALDGKSVVMLFEKPSLRTRVSFDIGI 60
           ++H L   +L  ++   ++ LA     N    +     ++V +LF+KPS RTR SF IG+
Sbjct: 5   LRHMLRDDDLNHEEQKQVLELAIKFSKNRFYKQPFAGPQAVAVLFDKPSTRTRSSFSIGV 64

Query: 61  NKFGGHCLYLDQQNGALGKRESVADFASNLSCWADAIVARTYSHTTIEQLAEFGTVPVIN 120
            + GG+ L +D+    LG+ E VAD A  L   A  +V RT+    +E++A++ T PV+N
Sbjct: 65  AELGGYPLVIDKSGSQLGRGEPVADTARVLDRMAYGVVWRTFGQDRVEEMAKYSTHPVVN 124

Query: 121 ALSDLYHPCQALADFLTLAEH---FENISDVKLAYVGD-GNNVTNSLMYCAAILGATMTV 176
           AL+D +HPCQ LADF T+AEH    +N+ +  +AY+GD  NN++NS +   A+ G  + V
Sbjct: 125 ALTDDFHPCQILADFQTIAEHRGGVDNLKNQTIAYLGDAANNMSNSYLLGGAVAGMNVRV 184

Query: 177 ICPAGHFPDGYVVAEVQELASRYGGKIVLTSDI-DAIEGHDAIYTDTWISMGDPTPLAEI 235
             P G+ P   +VA+ + +A+  GG I++T+D  +A+ G D ++TDTW+SMG+    A  
Sbjct: 185 AGPQGYLPRPDIVADAERIAAENGGSILVTTDAREAVAGADCVFTDTWVSMGEEAEYAIR 244

Query: 236 KDKFAPYQVNNALMAKAGAH-FFMHCLPAHRGVEVTDAVMDGECSLILQQAENRMHAQNA 294
              F  YQVN  LMA A     F HCLPA+RG EVT  V+DG  S++  +AENR+HAQ A
Sbjct: 245 SKPFWDYQVNAELMALAKPDALFQHCLPAYRGKEVTAEVIDGPQSVVWDEAENRLHAQKA 304

Query: 295 VLVTL 299
           +L  L
Sbjct: 305 LLTWL 309