Pairwise Alignments

Query, 424 a.a., competence/damage-inducible protein CinA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 386 a.a., competence-damage inducible protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  210 bits (535), Expect = 5e-59
 Identities = 128/349 (36%), Positives = 194/349 (55%), Gaps = 7/349 (2%)

Query: 33  GIEIQRRVTVGDRLEDLIAVFQERSLHADVILVNGGLGPTSDDMSAEAMAKAKGESLVEN 92
           GIE+ R V++ DR E+++          +++LV GGLGPT DD++ + + K     L+ +
Sbjct: 9   GIEVLRIVSIRDREEEIMEAVDNAMKRVNIVLVTGGLGPTKDDITKQTLCKYFHTELIFS 68

Query: 93  SEWRQRLEDWFTRNNREMPVSNLKQAMLPVSAVMVDNPVGTACGFRVKLNRAWLFFTPGV 152
            E  + ++         M   N  QAM+P    +++NPVG+A     + +   L   PGV
Sbjct: 69  EEVFENVKRVLA-GKIPMNALNKSQAMVPKDCTVINNPVGSASVSWFEKDNKVLVSMPGV 127

Query: 153 PFELKHMVKEQFIPFIRDEFNLDAKVALKKLLTIGHGESALADKIEPLE--LPEGITIGY 210
           P E+  ++ E  +P +R++F  D  +  +  L   + ES LA+K+EP E  LPE I + Y
Sbjct: 128 PQEMTAVMTESVLPKLREKFQTDV-IMHRTFLVQHYPESILAEKLEPWETALPESIKLAY 186

Query: 211 RSSMPHIEIKIFARGEKAIAL---LPRVAGHIKMVLGTAVVAEDKATLAEEIHFRLLNSG 267
              +  I +++  RG+  I +   L      ++ +LG  + +E+   L   +   L    
Sbjct: 187 LPKLGIIRLRLTGRGQNKIEVESALNDEQAKLEAILGDDIFSEEDIPLEVIVGELLKKKN 246

Query: 268 LTLSAAESCTGGMITSQLVDFPGSSSYLQHGLVTYSNESKVRVLGVNPATLDDHGAVSIP 327
           LT+S AESCTGG I ++L    GSS Y   G+V YSNE K+ +L V+P TL+ +GAVS  
Sbjct: 247 LTVSTAESCTGGSIAARLTSIAGSSEYFNGGIVAYSNEVKMNLLHVSPETLEVYGAVSEQ 306

Query: 328 TVEEMAKGARAILDSDFALATSGIAGPDGGTEDKPVGTVAIALATRSGV 376
           TV EM KGA   L +D A+ATSGIAGP GGT +KPVGTV IA   ++ +
Sbjct: 307 TVIEMVKGAMKALKTDCAVATSGIAGPGGGTPEKPVGTVWIAAGYKNEI 355