Pairwise Alignments

Query, 659 a.a., cytochrome c-type biogenesis protein CcmF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 645 a.a., Cytochrome c heme lyase subunit CcmF from Xanthomonas campestris pv. campestris strain 8004

 Score =  640 bits (1651), Expect = 0.0
 Identities = 325/644 (50%), Positives = 430/644 (66%), Gaps = 12/644 (1%)

Query: 1   MIPELGHFSLIIGVAFAFLLTSVPLIGVARKDQYLVRYAWPLAYGMFFFIALSVVSLGYS 60
           M+PELG F L++ +  A +   VPL G  R     +  A P A      IA +   L ++
Sbjct: 1   MLPELGTFLLVLALLVALVQAVVPLAGAQRGRSAWMAVARPAALVQLALIAAAFAVLTHA 60

Query: 61  FAVDDFSVAYVAHHSNSQLPIFFKIAAVWGGHEGSLLFWVFALSTWAASVALFSKGLEEV 120
           F V DFSV YVA +SNS LP+ ++ +AVWG HEGSLL W   L+ W  +VA++S+ L   
Sbjct: 61  FLVQDFSVRYVAENSNSLLPLIYRYSAVWGAHEGSLLLWTLVLALWTGAVAIWSRQLPAQ 120

Query: 121 FTARVLAVLALIVIGFSLFMLLTSSPFERIFPMPAEGRDLNPMLQDVGLIFHPPMLYLGY 180
             ARVL V+AL+ IGF  F+L TS+PF R+ P+P EG DLNP+LQD GLI HPPMLY GY
Sbjct: 121 VIARVLGVMALVSIGFLAFLLFTSNPFARLMPVPLEGADLNPLLQDPGLIIHPPMLYCGY 180

Query: 181 VGFSVSFAFAIAALMSGHLDSAWARWSRPWTLAAWVFLTGGIALGSWWAYYELGWGGWWF 240
           VGF+V FAFAIAAL+ G +D+ W RW+RPWT  AW  LT GIALGSWWAYYELGWGGWWF
Sbjct: 181 VGFAVPFAFAIAALLEGRMDARWLRWTRPWTNIAWSMLTVGIALGSWWAYYELGWGGWWF 240

Query: 241 WDPVENASFMPWLVGTALVHSLIVTEKRGAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTS 300
           WDPVENASFMPWLVGTAL+HS  VT KRG+F +WT+LL+I AF+LSLLGTF+VRSGVLTS
Sbjct: 241 WDPVENASFMPWLVGTALLHSQAVTGKRGSFASWTLLLAIAAFALSLLGTFLVRSGVLTS 300

Query: 301 VHSFAADPSRGMFILLLLGLAIGGSLTLFAFRASEMS---SPAR-FELKSKETMLLVCNV 356
           VHSFAADPSRG+FIL+ L   +GGSL L+  RA  +S    P R F   S+ET+LL+ N+
Sbjct: 301 VHSFAADPSRGVFILVFLLSVVGGSLLLYVLRAPRLSQGDDPRRAFAGSSRETLLLLNNL 360

Query: 357 LLTVAAGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIVLVLFAFMGVGPIIRWKKS 416
           LL  A   VLLGTLYPLL DALG+GK+SVGPPYF  +F+ ++  L A +  GP+ RW++ 
Sbjct: 361 LLACACAMVLLGTLYPLLADALGLGKLSVGPPYFGTLFLVLMAPLVALLPFGPLTRWQRD 420

Query: 417 KAGELKRQLLVPALVSLVIGIVTPFIV-DGAFNAWVACGIAAAAWIILATAKAAYSIVKP 475
           +       L   A +++V+G++  F    G   A  A G+A AAW++L T +  ++    
Sbjct: 421 QPSRPLAMLAPWAALAVVLGVLAWFAAPQGQLKA--ALGVAGAAWVVLGTLRFLWTRRAA 478

Query: 476 KDGEVSIARMGRSQLGMIIAHLGIAVSVIGATMVSNYSVEKSVRMGPGVSQELAGYTFKY 535
           K G    A M    LGM +AH G+AV + GA +V + S+++ V + PG   E+  Y   +
Sbjct: 479 K-GRKFTAEM----LGMALAHTGVAVFLAGALLVESLSLQREVALAPGQQMEIGSYALHF 533

Query: 536 LETKNVVGPNYTAQQGQIEIYKGDKLLTLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYVT 595
              K V GPNY + +  ++++K D  +  L  ++R+Y      +TEA I  G F DLYV 
Sbjct: 534 DGLKEVRGPNYVSDRATLQVFKDDAAVGTLHAEKRRYASGGQTLTEAAIRPGPFGDLYVA 593

Query: 596 MGDPISSTEFAVRLNYKPFVRWLWFGAIFMMVGGFFAASDKRYR 639
           +G+P+ +  +AVR++ KPFVRW+W GA+ M +GG   A+D+R+R
Sbjct: 594 LGEPLGNQAWAVRVHLKPFVRWIWLGALLMALGGLVTAADRRFR 637