Pairwise Alignments

Query, 203 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 214 a.a., TetR/AcrR family transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score = 42.7 bits (99), Expect = 5e-09
 Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 18/184 (9%)

Query: 4   RKEHSHDEIRVMAIEAAIALLQQQGVQGLSLRKIASEIGYVPSTLINIFGSYNYLLLAVS 63
           R  + H ++R   ++A I L +  G   + LR+     G  P+     F     LL  V 
Sbjct: 11  RATYRHGDLRRALLDAGIELARAGGPDAIVLREATRRAGVAPNAAYRHFAGRLDLLQGVR 70

Query: 64  EATLQLLMSHLSA------------VSENDSLRHIIVMAQKYSEFAHSQRQCFKLVFEL- 110
            A+L  L   + A                 SLR I V    Y  FA  +   F+  F + 
Sbjct: 71  AASLAALARAMEAELDAIDPTWPADAQARASLRAIGV---GYLRFAQMETGLFRTAFAVP 127

Query: 111 QLLESEHLPASQGQLIANLFRLIENELALLFPNETI--EQQLQMSRVLWGGIHGLTALSL 168
             +E++  PA  G    N F+L+   L  +     +  E++     + W  +HGL  L +
Sbjct: 128 DEVENDADPAKAGDSGLNPFQLLSLALDRMTAAGVLPAERRPGAEYLAWSAVHGLALLII 187

Query: 169 DNKL 172
           D  L
Sbjct: 188 DGPL 191