Pairwise Alignments

Query, 348 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 318 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 93.2 bits (230), Expect = 8e-24
 Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 27/287 (9%)

Query: 59  LEWMSAAEKPIH-PFYSEHISAVRGQLLSALIKPQTALLPAPNL------SGLVEQVQPA 111
           L W+   EK I  PF+ E I+  R ++     K ++A LPA NL      + L++ + P 
Sbjct: 21  LLWLDLQEKHIEEPFFDETINLCRFRM-----KERSAYLPASNLGFLEEAAKLIDSITPD 75

Query: 112 GFIFHLSRCGSTLVSRSFAGLSKCRALSESPLLTQVL----LDMILSDTERRAALIFCIN 167
            FIFH+SRCGSTL+S++ A +      +E+PLL ++L     D+ + + ++       I 
Sbjct: 76  AFIFHVSRCGSTLLSQALATVETNIVYAEAPLLDELLRMKEQDLSVKEAQQEFWFKSAIT 135

Query: 168 TQGQLFHPE-QHLLIKWNAWDLQFWPLILSLYPQVPVLLLLRDPVEILASQQKSAGYHMV 226
             GQ    +   L +K ++W + F+PL+   YP  P   L R+P  ++AS  K  G H V
Sbjct: 136 LMGQKRKAQYTKLFVKLDSWHIHFYPLLRKWYPDTPFFFLSREPDAVIASHCKRRGIHAV 195

Query: 227 RQPSRPLFLELSVPEEGESILDYQCKVLRLLLGYGLEMSQRNQV-----MVVDYQELLPA 281
                   L + + E  +   D+      +L  Y   +++   V        DY   +  
Sbjct: 196 PGMVNSGILRVRIQE--KHYQDFNLFTAEVLANYYKALAEIISVNHPKNTFYDYDWGVNL 253

Query: 282 IANKIANWFSLALSKEECSQVEQCQLIHSKTATQPFIAD-SPSKQSF 327
           + +       + L    C +++     HSK   + FI D  PS  S+
Sbjct: 254 MLSHFLK--VMQLDDAACEKMKTRLNYHSKNPDEKFIGDRKPSLASY 298