Pairwise Alignments

Query, 348 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 388 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  163 bits (413), Expect = 6e-45
 Identities = 110/334 (32%), Positives = 166/334 (49%), Gaps = 10/334 (2%)

Query: 5   NFCQYLRLFWHLPDCGDDTLLAILHTGNRQRIEPDYSLFCQFWAPADYDPKRRVLEWMSA 64
           +F   +  F + P+   + +LA +    +Q   PD + F Q W P+ Y  + +   W+  
Sbjct: 32  HFITLMADFLNWPELNLEQMLAFIAL-QQQGFIPDLARFSQVWFPSRYHAQTKTTSWVPV 90

Query: 65  AEKPIHPFYSEHISAVRGQLLSALIKPQTALLPAPNLSGLVEQVQPAGFIFHLSRCGSTL 124
            ++   PF  + I   R  LL++ I+PQT L P  +    +  + P   IFH SRCGSTL
Sbjct: 91  FQRLSKPFLEDDICDARRGLLASFIQPQTLLEPLLSQRESLPSINPNLMIFHWSRCGSTL 150

Query: 125 VSRSFAGLSKCRALSESPLLTQVLLDMILSDTERRAALIFCINTQGQLFHPEQHLLIKWN 184
           VS SF+ L  CR LSES L + V+       +     +  C+  QG+L   E  L+IKWN
Sbjct: 151 VSSSFSLLKTCRVLSESMLCSDVMHHDAWPSSLIPQLVDLCLRLQGRLRPDECELVIKWN 210

Query: 185 AWDLQFWPLILSLYPQVPVLLLLRDPVEILASQQKSAGYHMVRQPSR--PLFLELSVPEE 242
           AWDL  WP++L LYP   VL L+R P +ILAS Q+ AG HM  +     P  L LS    
Sbjct: 211 AWDLACWPMLLELYPDSRVLCLMRHPRDILASHQREAGMHMAGRVKAVFPYSLPLSENTH 270

Query: 243 GESILD-YQCKVLRLLLGYGLEMSQRNQVMVVDYQE---LLPAIANKIANWFSLALSKEE 298
           GE  LD ++  VL         + Q ++ +++DYQ+   L P+I + I +W    L++E+
Sbjct: 271 GELSLDVFRMGVLHGFTQQTAALYQSSRCILMDYQQLNALKPSILSAILDW---PLAEED 327

Query: 299 CSQVEQCQLIHSKTATQPFIADSPSKQSFFTVIQ 332
               +       K   Q F+   P++ +     Q
Sbjct: 328 IEHWQHHWRFDVKRQGQLFVPMVPAQSTLLNESQ 361