Pairwise Alignments

Query, 158 a.a., general secretion pathway protein M (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 178 a.a., GspM family type II secretion system protein YghD from Escherichia coli Nissle 1917

 Score = 80.9 bits (198), Expect = 1e-20
 Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 8/152 (5%)

Query: 10  GLASREQQIVGFGAVFLVIGVFYWGIWTPIANA---EANALRNLTAQQQTLTYVKQTANK 66
           G + RE+ ++   AVFL   V+Y  IW P++     +   L+ L A    L   K TA  
Sbjct: 31  GRSPREKGMLLAAAVFLFCAVYYVLIWQPLSERIEQQETMLQQLVAMNARL---KSTAPD 87

Query: 67  IAGLKQSGAKPTMSGSLSSVVNQTAGSYGLVITRMQPQGDKIQVWMDDVPFDALLNYLSD 126
           I   ++SG   T    +S V++ +A ++ +VI R+  +G+ IQVW++ V F+ LL +L+ 
Sbjct: 88  IIAARKSGT--TTQAQVSRVISDSASAHSVVIKRIAERGENIQVWIEPVVFNDLLKWLNA 145

Query: 127 LVQKKGLSLESVDLAEADAPGYVKVRRIQLAQ 158
           L +K  L +  +D++ A+ PG V V R++  +
Sbjct: 146 LDEKYALRVTQIDVSAAEKPGMVNVLRLEFGR 177